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L1_007_000M1_scaffold_1435

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Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1435_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..305)
DNA (303bp) protein (101aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V3A6_BACVU
multidrug efflux protein
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KDS55221.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_007_000M1_scaffold_1435_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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456..1286
DNA (831bp) protein (277aa)
Transcriptional regulator n=2 Tax=Bacteroides RepID=E5V039_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY72809.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
AraC family transcriptional regulator
L1_007_000M1_scaffold_1435_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1458..2558)
DNA (1101bp) protein (367aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:EFG19644.1}; EC=4.1.2.13 {ECO:0000313|EMBL:EFG19644.1};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Fructose-bisphosphate aldolase n=8 Tax=Bacteroides RepID=A6L0Y8_BACV8
L1_007_000M1_scaffold_1435_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2794..3048
DNA (255bp) protein (85aa)
50S ribosomal protein L31 type B n=7 Tax=Bacteroides RepID=RL31B_BACV8
rpmE2; 50S ribosomal protein L31
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000M1_scaffold_1435_5
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3133..3780)
DNA (648bp) protein (216aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6ZAE7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV65276.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L1_007_000M1_scaffold_1435_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3894..5192
DNA (1299bp) protein (433aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Phenylacetate-coenzyme A ligase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L0Y5_BACV8
phenylacetate-coenzyme A ligase
L1_007_000M1_scaffold_1435_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5204..5632
DNA (429bp) protein (143aa)
ACT domain protein n=7 Tax=Bacteroides RepID=C6ZAE9_9BACE
acetohydroxyacid synthase small subunit
Uncharacterized protein {ECO:0000313|EMBL:EOR97655.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000M1_scaffold_1435_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5675..8401)
DNA (2727bp) protein (909aa)
Sensor histidine kinase/response regulator n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V3B3_BACVU
Response regulator {ECO:0000313|EMBL:KDS30315.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
two-component system sensor histidine kinase/response regulator, hybrid
L1_007_000M1_scaffold_1435_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8597..9484)
DNA (888bp) protein (296aa)
Fructokinase n=7 Tax=Bacteroides RepID=A6L0Y2_BACV8
fructokinase
Fructokinase {ECO:0000313|EMBL:KDS30316.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_000M1_scaffold_1435_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9512..10672)
DNA (1161bp) protein (387aa)
Transporter, major facilitator family protein n=3 Tax=Bacteroides RepID=C6ZAF2_9BACE
sugar transport-related, membrane protein
Major Facilitator Superfamily protein {ECO:0000313|EMBL:KDS55230.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_007_000M1_scaffold_1435_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10688..12655)
DNA (1968bp) protein (656aa)
Fructan beta-fructosidase family protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V3B6_BACVU
Fructan beta-fructosidase family protein {ECO:0000313|EMBL:EFG19652.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
levanase
L1_007_000M1_scaffold_1435_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12720..15038)
DNA (2319bp) protein (773aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6ZAF4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS55232.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L1_007_000M1_scaffold_1435_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15674..16285
DNA (612bp) protein (204aa)
Putative DNA-binding protein n=2 Tax=Bacteroides RepID=C6ZAF5_9BACE
DNA-binding family protein {ECO:0000313|EMBL:KDS55233.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L1_007_000M1_scaffold_1435_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16327..17133)
DNA (807bp) protein (269aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Prolipoprotein diacylglyceryl transferase n=7 Tax=Bacteroides RepID=A6L0X7_BACV8
prolipoprotein diacylglyceryl transferase
L1_007_000M1_scaffold_1435_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17240..18139)
DNA (900bp) protein (300aa)
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:EFG19656.1}; EC=1.4.1.16 {ECO:0000313|EMBL:EFG19656.1};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Diaminopimelate dehydrogenase n=6 Tax=Bacteroides RepID=C6ZAF7_9BACE
oxidoreductase
L1_007_000M1_scaffold_1435_16
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18315..18908
DNA (594bp) protein (198aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
Holliday junction ATP-dependent DNA helicase RuvA n=7 Tax=Bacteroides RepID=RUVA_BACV8
ruvA; Holliday junction DNA helicase RuvA
L1_007_000M1_scaffold_1435_17
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18996..19820)
DNA (825bp) protein (275aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6L0X4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF17508.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_007_000M1_scaffold_1435_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19838..21340
DNA (1503bp) protein (501aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R7NVP8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOR97644.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
tRNA nucleotidyltransferase
L1_007_000M1_scaffold_1435_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21345..21827
DNA (483bp) protein (161aa)
Hemolysin III n=5 Tax=Bacteroides RepID=A6L0X2_BACV8
hemolysin III
Hemolysin-III related family protein {ECO:0000313|EMBL:KDS30326.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_000M1_scaffold_1435_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22252..24528
DNA (2277bp) protein (759aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:KDS55240.1}; EC=1.17.4.2 {ECO:0000313|EMBL:KDS55240.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
anaerobic ribonucleoside triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=4 Tax=Bacteroides RepID=C6ZAG2_9BACE
L1_007_000M1_scaffold_1435_21
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24534..24992
DNA (459bp) protein (153aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NZG3_9BACE
ribonucleoside-triphosphate reductase
L1_007_000M1_scaffold_1435_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25567..26910)
DNA (1344bp) protein (448aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Membrane-associated zinc metalloprotease n=5 Tax=Bacteroides RepID=A6L0W9_BACV8
membrane-associated zinc metalloprotease
L1_007_000M1_scaffold_1435_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26967..28115)
DNA (1149bp) protein (383aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=8 Tax=root RepID=DXR_BACV8
L1_007_000M1_scaffold_1435_24
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28123..28980)
DNA (858bp) protein (286aa)
Peptidase, M23 family n=11 Tax=Bacteroides RepID=C3Q7A0_9BACE
membrane peptidase
Putative uncharacterized protein {ECO:0000313|EMBL:EEB27239.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L1_007_000M1_scaffold_1435_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28999..29517)
DNA (519bp) protein (173aa)
Ribosome maturation factor RimM n=6 Tax=Bacteroides RepID=C6ZAG7_9BACE
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
16S rRNA processing protein RimM
L1_007_000M1_scaffold_1435_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29529..30833)
DNA (1305bp) protein (435aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H920_BACVU
L1_007_000M1_scaffold_1435_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30852..31478)
DNA (627bp) protein (209aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=A6L0W4_BACV8
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFG19418.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L1_007_000M1_scaffold_1435_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31525..32214)
DNA (690bp) protein (230aa)
Universal bacterial protein YeaZ n=7 Tax=Bacteroides RepID=C6ZAH0_9BACE
glycoprotease
Universal bacterial protein YeaZ {ECO:0000313|EMBL:EIY72838.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_007_000M1_scaffold_1435_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32289..33185
DNA (897bp) protein (299aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=A6L0W2_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39326.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_000M1_scaffold_1435_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33232..33801
DNA (570bp) protein (190aa)
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Guanylate kinase n=7 Tax=Bacteroides RepID=A6L0W1_BACV8
Displaying items 1-30 of 57 in total

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