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L1_007_000M1_scaffold_1450

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1450_1
unknown

Not on your lists

comp(1..96)
DNA (96bp) protein (32aa)

This feature has no annotations

L1_007_000M1_scaffold_1450_2
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(292..1599)
DNA (1308bp) protein (436aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M775_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:ERJ97584.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L1_007_000M1_scaffold_1450_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1596..2327)
DNA (732bp) protein (244aa)
LytTr DNA-binding domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2ME69_9FIRM
LytTr DNA-binding domain protein {ECO:0000313|EMBL:ERJ97583.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Response regulator of the LytR/AlgR family
L1_007_000M1_scaffold_1450_4
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2450..2629)
DNA (180bp) protein (60aa)
DNA binding domain, excisionase family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M6T8_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:ERJ97459.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1450_5
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2649..2837)
DNA (189bp) protein (63aa)
DNA binding domain, excisionase family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KZC3_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:ERJ97460.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1450_6
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3068..3616)
DNA (549bp) protein (183aa)
Fic family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KWV4_9FIRM
Fic family protein {ECO:0000313|EMBL:ERJ96545.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1450_7
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3783..4328)
DNA (546bp) protein (182aa)
Uncharacterized protein (Fragment) n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MB95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96543.1}; Flags: Fragment;; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1450_8
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4310..4687)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KFZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ97456.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1450_9
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5143..5427
DNA (285bp) protein (95aa)
Uncharacterized protein (Fragment) n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M342_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96174.1}; Flags: Fragment;; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1450_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5495..6625
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KV60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96172.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_1450_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6627..7586
DNA (960bp) protein (320aa)
Class II glutamine amidotransferase (Fragment) n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KVP3_9FIRM
Class II glutamine amidotransferase {ECO:0000313|EMBL:ERJ96135.1}; Flags: Fragment;; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
glutamine amidotransferase
L1_007_000M1_scaffold_1450_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7727..7894
DNA (168bp) protein (56aa)
Resolvase protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KVR9_9FIRM
Resolvase protein {ECO:0000313|EMBL:ERJ96170.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
resolvase
L1_007_000M1_scaffold_1450_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7833..8267
DNA (435bp) protein (145aa)
Resolvase protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KC99_9FIRM
Resolvase protein {ECO:0000313|EMBL:ERJ96136.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
resolvase/recombinase
L1_007_000M1_scaffold_1450_14
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8792..9757)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M313_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96139.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1450_15
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10281..11780
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KVP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96140.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1450_16
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11801..13543
DNA (1743bp) protein (581aa)
Helicase protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KV33_9FIRM
Helicase protein {ECO:0000313|EMBL:ERJ96142.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1450_17
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13674..13901
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MA12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96143.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1450_18
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13929..14366
DNA (438bp) protein (146aa)
Site-specific recombinase, phage integrase family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M317_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERJ96144.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
integrase family protein
L1_007_000M1_scaffold_1450_19
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14367..14984
DNA (618bp) protein (206aa)
Site-specific recombinase, phage integrase family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M317_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERJ96144.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
integrase family protein
L1_007_000M1_scaffold_1450_20
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15030..15662)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KVQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96145.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1450_21
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15643..16911)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KCA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96146.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ABC transporter ATP-binding protein
L1_007_000M1_scaffold_1450_22
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17189..17590)
DNA (402bp) protein (134aa)
30S ribosomal protein S9 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KV38_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
SSU ribosomal protein S9P
L1_007_000M1_scaffold_1450_23
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17609..18037)
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MA15_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
LSU ribosomal protein L13P
L1_007_000M1_scaffold_1450_24
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18404..18742
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M321_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96149.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1450_25
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18805..18996)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7F9X2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE11238.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
L1_007_000M1_scaffold_1450_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19116..20054
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1U5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96752.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative HRDC domain protein
L1_007_000M1_scaffold_1450_27
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20076..21950
DNA (1875bp) protein (625aa)
asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KV23_9FIRM
Asparagine synthase {ECO:0000313|EMBL:ERJ96132.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1450_28
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21969..22637
DNA (669bp) protein (223aa)
HD domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MA03_9FIRM
HD domain protein {ECO:0000313|EMBL:ERJ96133.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1450_29
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22725..23810
DNA (1086bp) protein (362aa)
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M308_9FIRM
Aspartate carbamoyltransferase {ECO:0000313|EMBL:ERJ96134.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1450_30
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24315..24716)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KC73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96106.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Predicted membrane protein
Displaying items 1-30 of 67 in total

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