name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L1_007_000M1_scaffold_1544_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(107..1543)
----------------- DNA (1437bp) protein (479aa) |
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KYT9_9FIRM
integral membrane sensor signal transduction histidine kinase
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L1_007_000M1_scaffold_1544_2
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(1612..2310)
----------------- DNA (699bp) protein (233aa) |
Putative transcriptional regulatory protein ResD n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MDU0_9FIRM
Putative transcriptional regulatory protein ResD {ECO:0000313|EMBL:ERJ97463.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
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L1_007_000M1_scaffold_1544_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
2816..3106
----------------- DNA (291bp) protein (97aa) |
10 kDa chaperonin n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KG01_9FIRM
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Heat shock protein 60 family co-chaperone GroES
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L1_007_000M1_scaffold_1544_4
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
3155..4786
----------------- DNA (1632bp) protein (544aa) |
60 kDa chaperonin n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KYU7_9FIRM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
chaperonin GroL
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L1_007_000M1_scaffold_1544_5
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(4954..6357)
----------------- DNA (1404bp) protein (468aa) |
ABC transporter, solute-binding protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MDU5_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERJ97468.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ABC-type sugar transport system, periplasmic component
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L1_007_000M1_scaffold_1544_6
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
6725..8341
----------------- DNA (1617bp) protein (539aa) |
Dockerin type I repeat-containing domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M6U7_9FIRM
Dockerin type I repeat-containing domain protein {ECO:0000313|EMBL:ERJ97469.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Carbohydrate binding module (family 6).
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L1_007_000M1_scaffold_1544_7
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(8421..8876)
----------------- DNA (456bp) protein (152aa) |
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FFT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE12567.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
hypothetical protein
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L1_007_000M1_scaffold_1544_8
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(8889..9329)
----------------- DNA (441bp) protein (147aa) |
Response regulator receiver protein n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FD22_9FIRM
Response regulator receiver protein {ECO:0000313|EMBL:CDE12566.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
response regulator receiver protein
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L1_007_000M1_scaffold_1544_9
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
9606..10880
----------------- DNA (1275bp) protein (425aa) |
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K5N1_9FIRM
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L1_007_000M1_scaffold_1544_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
11330..12565
----------------- DNA (1236bp) protein (412aa) |
RmuC domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KNZ1_9FIRM
RmuC domain protein {ECO:0000313|EMBL:ERJ93790.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
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L1_007_000M1_scaffold_1544_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(12684..13988)
----------------- DNA (1305bp) protein (435aa) |
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K5K9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ93791.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
permease
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L1_007_000M1_scaffold_1544_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(14282..16675)
----------------- DNA (2394bp) protein (798aa) |
metH; Methionine synthase (EC:2.1.1.13)
Putative 5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M379_9FIRM
Putative 5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:ERJ93793.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
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L1_007_000M1_scaffold_1544_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(16714..17199)
----------------- DNA (486bp) protein (162aa) |
Acetyltransferase, GNAT family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LWD1_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERJ93794.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
N-acetyltransferase
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L1_007_000M1_scaffold_1544_14
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(17299..17964)
----------------- DNA (666bp) protein (222aa) |
Vitamin B12 dependent methionine synthase, activation domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KNZ6_9FIRM
Vitamin B12 dependent methionine synthase, activation domain protein {ECO:0000313|EMBL:ERJ93795.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Vitamin B12 dependent methionine synthase activation region
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L1_007_000M1_scaffold_1544_15
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(17958..18833)
----------------- DNA (876bp) protein (292aa) |
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
5,10-methylenetetrahydrofolate reductase, prokaryotic form (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K5L5_9FIRM
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L1_007_000M1_scaffold_1544_16
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(18968..20590)
----------------- DNA (1623bp) protein (541aa) |
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KND4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ93797.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
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L1_007_000M1_scaffold_1544_17
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(20592..21299)
----------------- DNA (708bp) protein (236aa) |
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M384_9FIRM
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L1_007_000M1_scaffold_1544_18
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
21587..23011
----------------- DNA (1425bp) protein (475aa) |
Protein translocase subunit SecD n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KP00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ93800.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
secD; Protein-export membrane protein SecD
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L1_007_000M1_scaffold_1544_19
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
22995..23996
----------------- DNA (1002bp) protein (334aa) |
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K5M1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ93801.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
protein-export membrane protein SecF
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L1_007_000M1_scaffold_1544_20
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
24221..25015
----------------- DNA (795bp) protein (265aa) |
AP endonuclease, family 2 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KNE1_9FIRM
AP endonuclease, family 2 {ECO:0000313|EMBL:ERJ93802.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Sugar phosphate isomerases/epimerases
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L1_007_000M1_scaffold_1544_21
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
25072..25527
----------------- DNA (456bp) protein (152aa) |
Transcriptional repressor NrdR n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FB48_9FIRM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
transcriptional regulator NrdR
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L1_007_000M1_scaffold_1544_22
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
25568..25948
----------------- DNA (381bp) protein (127aa) |
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LWE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ93804.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Predicted membrane protein
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L1_007_000M1_scaffold_1544_23
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(25949..26386)
----------------- DNA (438bp) protein (146aa) |
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KP04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ93805.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
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L1_007_000M1_scaffold_1544_24
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
26464..27219
----------------- DNA (756bp) protein (252aa) |
rsuA; Ribosomal small subunit pseudouridine synthase A (EC:5.4.99.12)
Putative 16S pseudouridylate synthase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K5M6_9FIRM
Putative 16S pseudouridylate synthase {ECO:0000313|EMBL:ERJ93806.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
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L1_007_000M1_scaffold_1544_25
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
27365..28501
----------------- DNA (1137bp) protein (379aa) |
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KNE5_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERJ93807.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
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L1_007_000M1_scaffold_1544_26
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
29243..29638
----------------- DNA (396bp) protein (132aa) |
Secondary thiamine-phosphate synthase enzyme n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KWX9_9FIRM
Secondary thiamine-phosphate synthase enzyme {ECO:0000313|EMBL:ERJ96575.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
thiamine-phosphate synthase
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L1_007_000M1_scaffold_1544_27
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
29654..30394
----------------- DNA (741bp) protein (247aa) |
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
NAD-dependent protein deacetylase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M4B3_9FIRM
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L1_007_000M1_scaffold_1544_28
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
30391..30846
----------------- DNA (456bp) protein (152aa) |
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MBB4_9FIRM
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L1_007_000M1_scaffold_1544_29
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
31730..33022
----------------- DNA (1293bp) protein (431aa) |
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KY60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ97025.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
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L1_007_000M1_scaffold_1544_30
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
33197..34831
----------------- DNA (1635bp) protein (545aa) |
Serine protease do-like HtrA family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M5L4_9FIRM
Serine protease do-like HtrA family protein {ECO:0000313|EMBL:ERJ97024.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
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