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L1_007_000M1_scaffold_1550

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1550_1
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..311)
DNA (309bp) protein (103aa)
SIS domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BH16_9FIRM
SIS domain protein {ECO:0000313|EMBL:EDM63004.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
glucokinase
L1_007_000M1_scaffold_1550_2
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(359..1129)
DNA (771bp) protein (257aa)
Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family (EC:3.1.3.25)
Archaeal fructose-1 6-bisphosphatase and related enzymes of inositol monophosphatase family n=1 Tax=Ruminococcus sp. CAG:55 PF99_9FIRM">RepID=R6PF99_9FIRM
Archaeal fructose-1 6-bisphosphatase and related enzymes of inositol monophosphatase family {ECO:0000313|EMBL:CDC17181.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_1550_3
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1492..2094)
DNA (603bp) protein (201aa)
phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein (EC:2.7.1.39 3.1.3.3)
Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein n=2 Tax=Clostridiales RepID=D4M044_9FIRM
Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein {ECO:0000313|EMBL:CDC17180.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_1550_4
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2246..3928)
DNA (1683bp) protein (561aa)
Phosphomannomutase {ECO:0000313|EMBL:CBL27403.1}; EC=5.4.2.8 {ECO:0000313|EMBL:CBL27403.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase n=2 Tax=Clostridiales RepID=D4M043_9FIRM
L1_007_000M1_scaffold_1550_5
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4118..5494)
DNA (1377bp) protein (459aa)
Transporter n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NYH8_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Na+-dependent transporters of the SNF family
L1_007_000M1_scaffold_1550_6
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5663..6754)
DNA (1092bp) protein (364aa)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components (EC:3.6.3.34)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components {ECO:0000313|EMBL:CBL27401.1}; EC=3.6.3.34 {ECO:0000313|EMBL:CBL27401.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components n=1 Tax=Ruminococcus torques L2-14 RepID=D4M041_9FIRM
L1_007_000M1_scaffold_1550_7
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6756..7796)
DNA (1041bp) protein (347aa)
ABC-type Fe3+-siderophore transport system, permease component n=1 Tax=Ruminococcus torques L2-14 RepID=D4M040_9FIRM
ABC-type Fe3+-siderophore transport system, permease component
ABC-type Fe3+-siderophore transport system, permease component {ECO:0000313|EMBL:CBL27400.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_1550_8
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7801..9015)
DNA (1215bp) protein (405aa)
ABC-type Fe3+-hydroxamate transport system periplasmic component n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P141_9FIRM
ABC-type Fe3+-hydroxamate transport system periplasmic component {ECO:0000313|EMBL:CDC17165.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ABC-type Fe3+-hydroxamate transport system, periplasmic component
L1_007_000M1_scaffold_1550_9
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9030..11939)
DNA (2910bp) protein (970aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M038_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27398.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_1550_10
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12355..13434)
DNA (1080bp) protein (360aa)
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Ruminococcus torques L2-14 RepID=D4M037_9FIRM
L1_007_000M1_scaffold_1550_11
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13588..14148)
DNA (561bp) protein (187aa)
Chromate transport protein ChrA n=1 Tax=Ruminococcus torques L2-14 RepID=D4M036_9FIRM
Chromate transport protein ChrA
Chromate transport protein ChrA {ECO:0000313|EMBL:CBL27396.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_1550_12
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14145..14753)
DNA (609bp) protein (203aa)
Chromate transport protein ChrA n=1 Tax=Ruminococcus torques L2-14 RepID=D4M035_9FIRM
Chromate transport protein ChrA
Chromate transport protein ChrA {ECO:0000313|EMBL:CBL27395.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_1550_13
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15019..16047
DNA (1029bp) protein (343aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PA69_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDC17599.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_1550_14
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16091..16777
DNA (687bp) protein (229aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Ruminococcus torques L2-14 RepID=D4M034_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBL27394.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_1550_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16913..17908)
DNA (996bp) protein (332aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M033_9FIRM
FKBP-type peptidyl-prolyl cis-trans isomerases 2
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_1550_16
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17980..18468
DNA (489bp) protein (163aa)
G:T/U mismatch-specific DNA glycosylase n=2 Tax=Clostridiales RepID=D4M032_9FIRM
G:T/U mismatch-specific DNA glycosylase
G:T/U mismatch-specific DNA glycosylase {ECO:0000313|EMBL:CDC17602.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_1550_17
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18533..19594)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NZR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17603.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L1_007_000M1_scaffold_1550_18
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20023..20124
DNA (102bp) protein (34aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6LK96_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB86320.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L1_007_000M1_scaffold_1550_19
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20209..21000)
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M029_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27389.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_1550_20
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21081..21407)
DNA (327bp) protein (109aa)
Transcriptional regulator, MarR family n=1 Tax=Ruminococcus torques L2-14 RepID=D4M028_9FIRM
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CBL27388.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_1550_21
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21653..22429)
DNA (777bp) protein (259aa)
Predicted divalent heavy-metal cations transporter n=1 Tax=Ruminococcus torques L2-14 RepID=D4M027_9FIRM
Predicted divalent heavy-metal cations transporter
Predicted divalent heavy-metal cations transporter {ECO:0000313|EMBL:CBL27387.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_1550_22
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23033..24340)
DNA (1308bp) protein (436aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M026_9FIRM
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
Uncharacterized protein {ECO:0000313|EMBL:CBL27386.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_1550_23
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24577..26337
DNA (1761bp) protein (587aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PAT6_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:CDC15656.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
diguanylate cyclase (GGDEF) domain
L1_007_000M1_scaffold_1550_24
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26404..28494)
DNA (2091bp) protein (697aa)
Signal transduction histidine kinase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M025_9FIRM
Signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:CBL27385.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_1550_25
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28631..29296)
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M023_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27383.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_1550_26
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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comp(29553..30149)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XI87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA14545.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
hypothetical protein
L1_007_000M1_scaffold_1550_27
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30273..31556)
DNA (1284bp) protein (428aa)
Putative efflux protein, MATE family n=1 Tax=Ruminococcus torques L2-14 RepID=D4M021_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL27381.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_1550_28
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31622..32110)
DNA (489bp) protein (163aa)
Ureidoglycolate hydrolase n=2 Tax=Clostridiales RepID=D4M020_9FIRM
Ureidoglycolate hydrolase.
Ureidoglycolate hydrolase {ECO:0000313|EMBL:CBL27380.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_1550_29
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32245..32346
DNA (102bp) protein (34aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SPQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC59489.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
L1_007_000M1_scaffold_1550_30
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32388..33788)
DNA (1401bp) protein (467aa)
Transporter n=1 Tax=Clostridium sp. CAG:81 RepID=R5G1P6_9CLOT
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Na+-dependent transporters of the SNF family
Displaying items 1-30 of 36 in total

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