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L1_007_000M1_scaffold_1564

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1564_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..2754)
-----------------
DNA (2754bp)
protein (918aa)
Alpha-2-macroglobulin family protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VCD0_BACVU
MG2 domain protein {ECO:0000313|EMBL:KDS29636.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L1_007_000M1_scaffold_1564_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3242..3457)
-----------------
DNA (216bp)
protein (72aa)
Transcriptional regulator, y4mF family n=4 Tax=Bacteroides RepID=C6Z4M4_9BACE
transcriptional regulator
Transcriptional regulator, y4mF family protein {ECO:0000313|EMBL:KDS56552.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_007_000M1_scaffold_1564_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4370..4837
-----------------
DNA (468bp)
protein (156aa)
Cytidine/deoxycytidylate deaminase n=7 Tax=root RepID=A6L1N7_BACV8
cytidine/deoxycytidylate deaminase
Cytidine and deoxycytidylate deaminase zinc-binding region family protein {ECO:0000313|EMBL:KDS56555.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_007_000M1_scaffold_1564_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4899..6359)
-----------------
DNA (1461bp)
protein (487aa)
Aminoacyl-histidine dipeptidase n=7 Tax=Bacteroides RepID=A6L1N6_BACV8
aminoacyl-histidine dipeptidase
Xaa-His dipeptidase {ECO:0000313|EMBL:EOS03610.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000M1_scaffold_1564_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6356..7360)
-----------------
DNA (1005bp)
protein (335aa)
Uncharacterized protein n=7 Tax=root RepID=C6Z4M9_9BACE
dolichol-P-glucose synthetase
Uncharacterized protein {ECO:0000313|EMBL:EIY81501.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_007_000M1_scaffold_1564_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7459..8301
-----------------
DNA (843bp)
protein (281aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Bacteroides vulgatus RepID=RSMA_BACV8
ksgA; dimethyladenosine transferase
L1_007_000M1_scaffold_1564_7
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8333..9673
-----------------
DNA (1341bp)
protein (447aa)
Magnesium transporter n=14 Tax=Bacteroides RepID=C3Q5T1_9BACE
magnesium transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L1_007_000M1_scaffold_1564_8
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9934..11742
-----------------
DNA (1809bp)
protein (603aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NYX1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF17900.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L1_007_000M1_scaffold_1564_9
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12271..12630
-----------------
DNA (360bp)
protein (120aa)
Ribosomal silencing factor RsfS n=7 Tax=Bacteroides RepID=A6L1N1_BACV8
hypothetical protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_007_000M1_scaffold_1564_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12684..14654
-----------------
DNA (1971bp)
protein (657aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
ATP-dependent zinc metalloprotease FtsH n=4 Tax=Bacteroides RepID=D4VCC0_BACVU
metalloprotease FtsH
L1_007_000M1_scaffold_1564_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14813..15652
-----------------
DNA (840bp)
protein (280aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Phosphatidate cytidylyltransferase n=7 Tax=Bacteroides RepID=A6L1M9_BACV8
phosphatidate cytidylyltransferase
L1_007_000M1_scaffold_1564_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15644..16378)
-----------------
DNA (735bp)
protein (245aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L1M8_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39592.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_000M1_scaffold_1564_13
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16435..16779)
-----------------
DNA (345bp)
protein (115aa)
Glycosyltransferase family 19, candidate lipid-alpha-disaccharide synthase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L1M7_BACV8
glycosyltransferase family lipid-alpha-disaccharide synthase
Glycosyltransferase family 19 {ECO:0000313|EMBL:EFV65176.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_007_000M1_scaffold_1564_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16776..17507)
-----------------
DNA (732bp)
protein (244aa)
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:KDS56567.1}; EC=2.4.1.182 {ECO:0000313|EMBL:KDS56567.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Lipid-A-disaccharide synthase n=6 Tax=root RepID=C6Z4N7_9BACE
glycosyltransferase family lipid-alpha-disaccharide synthase
L1_007_000M1_scaffold_1564_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17504..18277)
-----------------
DNA (774bp)
protein (258aa)
surE; stationary phase survival protein SurE (EC:3.1.3.2)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
5'-nucleotidase SurE n=6 Tax=Bacteroides RepID=SURE_BACV8
L1_007_000M1_scaffold_1564_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18535..19302
-----------------
DNA (768bp)
protein (256aa)
ParA family ATPase n=9 Tax=root RepID=A6L1M5_BACV8
ParA family ATPase
Chromosome partitioning protein {ECO:0000313|EMBL:EOS03625.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000M1_scaffold_1564_17
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19306..20202
-----------------
DNA (897bp)
protein (299aa)
ParB-like protein n=16 Tax=root RepID=D4VCB4_BACVU
chromosome partitioning protein ParB
Putative chromosome partitioning protein ParB {ECO:0000313|EMBL:CDF17908.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_007_000M1_scaffold_1564_18
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20272..20979
-----------------
DNA (708bp)
protein (236aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C3Q5U1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET15905.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L1_007_000M1_scaffold_1564_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20984..22246
-----------------
DNA (1263bp)
protein (421aa)
Glycoside hydrolase family 23 n=6 Tax=Bacteroides RepID=A6L1M2_BACV8
glycoside hydrolase
Uncharacterized protein {ECO:0000313|EMBL:EIY81514.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_007_000M1_scaffold_1564_20
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22348..24618
-----------------
DNA (2271bp)
protein (757aa)
RelA/SpoT family protein n=5 Tax=Bacteroides RepID=I9A1A0_BACVU
RelA/SpoT family protein {ECO:0000313|EMBL:CDF17911.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
GTP pyrophosphokinase
L1_007_000M1_scaffold_1564_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24710..25057)
-----------------
DNA (348bp)
protein (116aa)
Transcriptional regulator n=7 Tax=Bacteroides RepID=A6L1M0_BACV8
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EIY81516.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_007_000M1_scaffold_1564_22
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25091..26059)
-----------------
DNA (969bp)
protein (323aa)
Peptidase, M23 family n=6 Tax=Bacteroides RepID=C6Z4P5_9BACE
peptidase
Putative peptidase {ECO:0000313|EMBL:CDF17913.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_007_000M1_scaffold_1564_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


26202..28817
-----------------
DNA (2616bp)
protein (872aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Alanine--tRNA ligase n=4 Tax=Bacteroides vulgatus RepID=SYA_BACV8
L1_007_000M1_scaffold_1564_24
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29139..30557)
-----------------
DNA (1419bp)
protein (473aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6Z4P7_9BACE
ATP-dependent exodeoxyribonuclease
ATP-dependent exodeoxyribonuclease {ECO:0000313|EMBL:EFV65165.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_007_000M1_scaffold_1564_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30655..31341
-----------------
DNA (687bp)
protein (229aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L1L6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY81520.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_007_000M1_scaffold_1564_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31344..32168
-----------------
DNA (825bp)
protein (275aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A6L1L5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39579.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_000M1_scaffold_1564_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32159..32719
-----------------
DNA (561bp)
protein (187aa)
RNA methyltransferase, RsmD family n=6 Tax=Bacteroides RepID=D4VCA4_BACVU
RsmD family RNA methyltransferase {ECO:0000313|EMBL:EIY81522.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
methyltransferase
L1_007_000M1_scaffold_1564_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32688..34124)
-----------------
DNA (1437bp)
protein (479aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Cardiolipin synthetase n=6 Tax=Bacteroides RepID=E5V0B5_9BACE
cardiolipin synthetase
L1_007_000M1_scaffold_1564_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34217..36904)
-----------------
DNA (2688bp)
protein (896aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L1L2_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39576.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_000M1_scaffold_1564_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36876..37082)
-----------------
DNA (207bp)
protein (69aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9J4Z9_BACVU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS03638.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Displaying items 1-30 of 34 in total

View Taxonomy