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L1_007_000M1_scaffold_1570

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1570_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..458)
DNA (456bp) protein (152aa)
IS605 OrfB family transposase n=2 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5M0B2_9FIRM
IS605 OrfB family transposase {ECO:0000313|EMBL:EQM98836.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
IS605 family transposase OrfB
L1_007_000M1_scaffold_1570_2
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(433..558)
DNA (126bp) protein (42aa)
Transposase and inactivated derivatives n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GVL7_9FIRM
Transposase and inactivated derivatives
Transposase and inactivated derivatives {ECO:0000313|EMBL:CBL41859.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_000M1_scaffold_1570_3
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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963..2579
DNA (1617bp) protein (539aa)
Mannitol-1-phosphate/altronate dehydrogenases (EC:1.1.1.57)
Mannitol-1-phosphate/altronate dehydrogenases n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GT22_9FIRM
Mannitol-1-phosphate/altronate dehydrogenases {ECO:0000313|EMBL:CDE29893.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L1_007_000M1_scaffold_1570_4
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2643..4001
DNA (1359bp) protein (453aa)
Gluconate transporter n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LKF7_9FIRM
gluconate transporter
Gluconate transporter {ECO:0000313|EMBL:CBL20318.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_000M1_scaffold_1570_5
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4016..5236
DNA (1221bp) protein (407aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Sugar kinases, ribokinase family {ECO:0000313|EMBL:CBL20317.1}; EC=2.7.1.4 {ECO:0000313|EMBL:CBL20317.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Sugar kinases, ribokinase family n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LKF6_9FIRM
L1_007_000M1_scaffold_1570_6
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5330..5635
DNA (306bp) protein (102aa)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. (EC:4.4.1.5)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily {ECO:0000313|EMBL:CBL20316.1}; EC=4.4.1.5 {ECO:0000313|EMBL:CBL20316.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily n=2 Tax=Clostridiales RepID=D4LKF5_9FIRM
L1_007_000M1_scaffold_1570_7
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5837..6481
DNA (645bp) protein (215aa)
Transcriptional regulator GntR family n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GS52_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDE29896.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
transcriptional regulator, GntR family
L1_007_000M1_scaffold_1570_8
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6658..8037
DNA (1380bp) protein (460aa)
Amino acid permease n=1 Tax=Blautia sp. KLE 1732 RepID=U2D070_9FIRM
Amino acid permease {ECO:0000313|EMBL:ERI90185.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Amino acid transporters
L1_007_000M1_scaffold_1570_9
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8030..9439
DNA (1410bp) protein (470aa)
Beta-lactamase class C and other penicillin binding proteins n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LKF2_9FIRM
Beta-lactamase class C and other penicillin binding proteins
Beta-lactamase class C and other penicillin binding proteins {ECO:0000313|EMBL:CBL20313.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_000M1_scaffold_1570_10
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9628..10638
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GR46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE29899.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
hypothetical protein
L1_007_000M1_scaffold_1570_11
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10635..11987
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NMM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98586.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted metallopeptidase (DUF2201).
L1_007_000M1_scaffold_1570_12
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12133..14547
DNA (2415bp) protein (805aa)
Chitobiose phosphorylase {ECO:0000313|EMBL:CBL20311.1}; EC=2.4.1.- {ECO:0000313|EMBL:CBL20311.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
chitobiose phosphorylase (EC:2.4.1.-)
Chitobiose phosphorylase n=2 Tax=Clostridiales RepID=D4LKF0_9FIRM
L1_007_000M1_scaffold_1570_13
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14644..17343
DNA (2700bp) protein (900aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2D087_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI90190.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L1_007_000M1_scaffold_1570_14
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17489..18229)
DNA (741bp) protein (247aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LKE8_9FIRM
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CBL20309.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_000M1_scaffold_1570_15
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18403..19770
DNA (1368bp) protein (456aa)
ABC transporter, solute-binding protein n=2 Tax=Clostridiales RepID=U2E7B8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL20308.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_000M1_scaffold_1570_16
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19843..20796
DNA (954bp) protein (318aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LKE5_9FIRM
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL20306.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_000M1_scaffold_1570_17
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20793..21641
DNA (849bp) protein (283aa)
ABC transporter, permease protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2CI88_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:ERI90194.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
multiple sugar transport system permease
L1_007_000M1_scaffold_1570_18
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21662..24121
DNA (2460bp) protein (820aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Beta-glucosidase-related glycosidases {ECO:0000313|EMBL:CBL20304.1}; EC=3.2.1.21 {ECO:0000313|EMBL:CBL20304.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Beta-glucosidase-related glycosidases n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LKE3_9FIRM
L1_007_000M1_scaffold_1570_19
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24275..25837
DNA (1563bp) protein (521aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LKE2_9FIRM
ATPase family associated with various cellular activities (AAA).
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:CBL20303.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_000M1_scaffold_1570_20
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26196..26816
DNA (621bp) protein (207aa)
Transcriptional regulator, GntR family n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LKE1_9FIRM
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CBL20302.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_000M1_scaffold_1570_21
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27174..28304
DNA (1131bp) protein (377aa)
malate dehydrogenase (NAD) (EC:1.1.1.37)
Malate dehydrogenase (NAD) {ECO:0000313|EMBL:CBL20301.1}; EC=1.1.1.37 {ECO:0000313|EMBL:CBL20301.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Malate dehydrogenase (NAD) n=2 Tax=Clostridiales RepID=D4LKE0_9FIRM
L1_007_000M1_scaffold_1570_22
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28361..29536
DNA (1176bp) protein (392aa)
Malic enzyme (EC:1.1.1.38)
Malic enzyme n=4 Tax=Clostridiales RepID=D4LKD9_9FIRM
Malic enzyme {ECO:0000313|EMBL:CDE29340.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L1_007_000M1_scaffold_1570_23
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29715..30773
DNA (1059bp) protein (353aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GQM8_9FIRM
L1_007_000M1_scaffold_1570_24
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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30790..31290
DNA (501bp) protein (167aa)
Putative small multi-drug export protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2E7C7_9FIRM
Putative small multi-drug export protein {ECO:0000313|EMBL:ERI90202.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Predicted membrane protein
L1_007_000M1_scaffold_1570_25
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31463..32524)
DNA (1062bp) protein (354aa)
Pilus retraction protein PilT n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GRJ4_9FIRM
Pilus retraction protein PilT {ECO:0000313|EMBL:CDE29343.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
pilus retraction protein PilT
L1_007_000M1_scaffold_1570_26
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32529..33014)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GPK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE29344.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
hypothetical protein
L1_007_000M1_scaffold_1570_27
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33011..33463)
DNA (453bp) protein (151aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R7GQH6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL20294.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_000M1_scaffold_1570_28
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33460..33954)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GQN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE29346.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
hypothetical protein
L1_007_000M1_scaffold_1570_29
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33951..34307)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GTV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE29347.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
hypothetical protein
L1_007_000M1_scaffold_1570_30
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34320..35363)
DNA (1044bp) protein (348aa)
Type II secretory pathway, component PulF n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LKD0_9FIRM
Type II secretory pathway, component PulF
Type II secretory pathway, component PulF {ECO:0000313|EMBL:CBL20291.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Displaying items 1-30 of 34 in total

View Taxonomy