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L1_007_000M1_scaffold_1571

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1571_1
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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1..183
DNA (183bp) protein (61aa)
Cytidylate kinase (EC:2.7.4.14)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AU24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46463.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L1_007_000M1_scaffold_1571_2
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(223..588)
DNA (366bp) protein (122aa)
GIY-YIG catalytic domain protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B0F1_9FIRM
GIY-YIG catalytic domain protein {ECO:0000313|EMBL:CCX46462.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Excinuclease ABC C subunit domain protein
L1_007_000M1_scaffold_1571_3
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

871..1659
DNA (789bp) protein (263aa)
ABC transporter substrate-binding protein family 3 n=2 Tax=root RepID=R5B4Q6_9FIRM
ABC transporter substrate-binding protein family 3 {ECO:0000313|EMBL:CCX46461.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L1_007_000M1_scaffold_1571_4
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

1735..2511
DNA (777bp) protein (259aa)
ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ASV0_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CCX46460.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-)
L1_007_000M1_scaffold_1571_5
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

2498..3220
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AWY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46459.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
GlnQ; polar amino acid ABC transporter ATPase
L1_007_000M1_scaffold_1571_6
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

3281..4102
DNA (822bp) protein (274aa)
rlmA; ribosomal RNA large subunit methyltransferase A (EC:2.1.1.187)
Putative ribosomal RNA large subunit methyltransferase A n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AU18_9FIRM
Putative ribosomal RNA large subunit methyltransferase A {ECO:0000313|EMBL:CCX46458.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L1_007_000M1_scaffold_1571_7
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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4273..4707
DNA (435bp) protein (145aa)
Hsp20/alpha crystallin family protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B0E7_9FIRM
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:CCX46457.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hsp20; Heat shock protein Hsp20
L1_007_000M1_scaffold_1571_8
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

4875..5753
DNA (879bp) protein (293aa)
Putative membrane protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B4P9_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CCX46456.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Permeases of the drug/metabolite transporter (DMT) superfamily
L1_007_000M1_scaffold_1571_9
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5924..7003
DNA (1080bp) protein (360aa)
Cobalamin biosynthesis protein CbiM n=1 Tax=Eubacterium sp. CAG:86 RepID=R5E7K8_9FIRM
Cobalamin biosynthesis protein CbiM {ECO:0000313|EMBL:CCX84757.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
ABC-type Co2+ transport system, permease component
L1_007_000M1_scaffold_1571_10
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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7107..7907
DNA (801bp) protein (267aa)
Cobalt ABC transporter permease protein CbiQ n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AU14_9FIRM
Cobalt ABC transporter permease protein CbiQ {ECO:0000313|EMBL:CCX46453.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
cobalt ABC transporter, permease protein CbiQ
L1_007_000M1_scaffold_1571_11
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

7920..8660
DNA (741bp) protein (247aa)
Cobalt import ATP-binding protein CbiO n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B0E2_9FIRM
Cobalt import ATP-binding protein CbiO {ECO:0000313|EMBL:CCX46452.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
ABC-type cobalt transport system, ATPase component
L1_007_000M1_scaffold_1571_12
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

8729..9868
DNA (1140bp) protein (380aa)
Putative membrane protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B4P3_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CCX46451.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
membrane protein
L1_007_000M1_scaffold_1571_13
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(9983..11200)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ASU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46450.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
5-methyltetrahydrofolate--homocysteine methyltransferase
L1_007_000M1_scaffold_1571_14
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(11222..12724)
DNA (1503bp) protein (501aa)
Uncharacterized metal-binding protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AU07_9FIRM
Uncharacterized metal-binding protein {ECO:0000313|EMBL:CCX46448.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Uncharacterized metal-binding protein
L1_007_000M1_scaffold_1571_15
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

12797..13333
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B0D8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46447.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_007_000M1_scaffold_1571_16
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

13339..15060
DNA (1722bp) protein (574aa)
Uroporphyrinogen decarboxylase (URO-D) n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B4N7_9FIRM
Uroporphyrinogen decarboxylase (URO-D) {ECO:0000313|EMBL:CCX46446.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_007_000M1_scaffold_1571_17
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

15491..17272
DNA (1782bp) protein (594aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Adenine deaminase (EC:3.5.4.2)
Adenine deaminase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AST6_9FIRM
L1_007_000M1_scaffold_1571_18
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

17309..18622
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AWW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46444.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
yieG; permease
L1_007_000M1_scaffold_1571_19
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18915..20144)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CS08_9FIRM
hypothetical protein
Tax=BJP_IG2069_Clostridiales_48_15
L1_007_000M1_scaffold_1571_20
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20345..24085
DNA (3741bp) protein (1247aa)
rpoB; DNA-directed RNA polymerase beta chain (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AX86_9CLOT
Tax=BJP_IG2069_Clostridiales_48_15
L1_007_000M1_scaffold_1571_21
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

24089..27811
DNA (3723bp) protein (1241aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
rpoC; DNA-directed RNA polymerase beta' subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=2 Tax=root RepID=R5AZ16_9FIRM
L1_007_000M1_scaffold_1571_22
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists


28083..28505
DNA (423bp) protein (141aa)
30S ribosomal protein S12 n=2 Tax=root RepID=R5AV18_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
rpsL; 30S ribosomal protein S12
L1_007_000M1_scaffold_1571_23
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists


28635..29105
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AZ20_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
rpsG; 30S ribosomal protein S7
L1_007_000M1_scaffold_1571_24
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

29130..31202
DNA (2073bp) protein (691aa)
Elongation factor G n=3 Tax=root RepID=R5AV23_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
fusA; elongation factor G
L1_007_000M1_scaffold_1571_25
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

31277..32515
DNA (1239bp) protein (413aa)
Elongation factor Tu n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B6X0_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
tuf; elongation factor Tu
L1_007_000M1_scaffold_1571_26
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

32761..33309
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AW29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47213.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L1_007_000M1_scaffold_1571_27
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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33328..34128
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MEE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66222.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
cell surface glycoprotein 2
L1_007_000M1_scaffold_1571_28
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(34205..34651)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AZ26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47214.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_007_000M1_scaffold_1571_29
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

34734..35447
DNA (714bp) protein (238aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
ribosomal small subunit pseudouridine synthase A (EC:5.4.99.- 5.4.99.12)
Pseudouridine synthase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B6X5_9FIRM
L1_007_000M1_scaffold_1571_30
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

35620..36714
DNA (1095bp) protein (365aa)
Uncharacterized protein n=2 Tax=root RepID=R5B2N4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47217.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
Displaying items 1-30 of 33 in total

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