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L1_007_000M1_scaffold_1585

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1585_1
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists


697..1005
DNA (309bp) protein (103aa)
30S ribosomal protein S10 id=2177916 bin=GWB2_Clostridiales_37_7 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
30S ribosomal protein S10
Tax=GWB2_Clostridiales_37_7_curated
L1_007_000M1_scaffold_1585_2
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1146..1781
DNA (636bp) protein (212aa)
50S ribosomal protein L3 n=1 Tax=Caloramator australicus RC3 RepID=I7J4Z8_9CLOT
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
50S ribosomal protein L3, bacterial
L1_007_000M1_scaffold_1585_3
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


1808..2431
DNA (624bp) protein (208aa)
50S ribosomal protein L4 n=1 Tax=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) RepID=D9TRV5_THETC
50S ribosomal protein L4/L1e
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=580327 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM; 571 / NCIB 9385 / NCA 3814) (Clostridium thermosaccharolyticum).;"
L1_007_000M1_scaffold_1585_4
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2431..2715
DNA (285bp) protein (95aa)
50S ribosomal protein L23 n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SX98_CLOC7
50S ribosomal protein L25
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L1_007_000M1_scaffold_1585_5
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists


2755..3588
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=2 Tax=root RepID=R6MYV8_9FIRM
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
50S ribosomal protein L2
L1_007_000M1_scaffold_1585_6
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3604..3876
DNA (273bp) protein (91aa)
30S ribosomal protein S19 n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GH20_EUBLK
hypothetical protein
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L1_007_000M1_scaffold_1585_7
Brevibacillus laterosporus, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3979..4314
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=2 Tax=Brevibacillus laterosporus RepID=F7TS99_BRELA
rplV; 50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1042163 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus laterosporus LMG 15441.;"
L1_007_000M1_scaffold_1585_8
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists


4333..5055
DNA (723bp) protein (241aa)
30S ribosomal protein S3 n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YC57_9FIRM
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
30S ribosomal protein S3
L1_007_000M1_scaffold_1585_9
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5055..5486
DNA (432bp) protein (144aa)
50S ribosomal protein L16 n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37768
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
LSU ribosomal protein L16P
L1_007_000M1_scaffold_1585_10
Bacillus hemicellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


5486..5698
DNA (213bp) protein (71aa)
50S ribosomal protein L29 n=1 Tax=Bacillus clausii (strain KSM-K16) RepID=RL29_BACSK
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1236971 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus hemicellulosilyticus JCM 9152.;"
rpmC; 50S ribosomal protein L29
L1_007_000M1_scaffold_1585_11
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5712..5969
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P526_9FIRM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
30S ribosomal protein S17
L1_007_000M1_scaffold_1585_12
Clostridium sp. CAG:1219, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5997..6365
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Clostridium sp. CAG:1219 RepID=R5TC32_9CLOT
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1262772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1219.;"
50S ribosomal protein L14
L1_007_000M1_scaffold_1585_13
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6466..6786
DNA (321bp) protein (107aa)
50S ribosomal protein L24 n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LC54_9FIRM
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
50S ribosomal protein L24
L1_007_000M1_scaffold_1585_14
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6820..7356
DNA (537bp) protein (179aa)
50S ribosomal protein L5 n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U832_ETHHY
50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
L1_007_000M1_scaffold_1585_15
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7382..7567
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZM7_CLOA9
rpsZ; 30S ribosomal protein S14, type Z
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
L1_007_000M1_scaffold_1585_16
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7680..8078
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Clostridium sp. CAG:678 RepID=R5L494_9CLOT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
30S ribosomal protein S8
L1_007_000M1_scaffold_1585_17
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists


8095..8640
DNA (546bp) protein (182aa)
50S ribosomal protein L6 n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DTS7_9FIRM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
rplF; 50S ribosomal protein L6
L1_007_000M1_scaffold_1585_18
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8666..9028
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FQJ8_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
50S ribosomal protein L18
L1_007_000M1_scaffold_1585_19
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9060..9590
DNA (531bp) protein (177aa)
30S ribosomal protein S5 n=7 Tax=Clostridium thermocellum RepID=RS5_CLOTH
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
30S ribosomal protein S5
L1_007_000M1_scaffold_1585_20
Bacillus smithii, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


9621..9800
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=1 Tax=Caldibacillus debilis RepID=UPI00035DFC39
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=665952 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus smithii 7_3_47FAA.;"
rpmD; 50S ribosomal protein L30
L1_007_000M1_scaffold_1585_21
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9855..10295
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=7 Tax=Clostridium thermocellum RepID=RL15_CLOTH
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000255|HAMAP-Rule:MF_01341}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L1_007_000M1_scaffold_1585_22
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


10298..11578
DNA (1281bp) protein (427aa)
Protein translocase subunit SecY n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M2F3_CLOCD
protein translocase subunit secY/sec61 alpha
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L1_007_000M1_scaffold_1585_23
Caldicellulosiruptor bescii, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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11731..12363
DNA (633bp) protein (211aa)
Adenylate kinase {ECO:0000255|HAMAP-Rule:MF_00235}; Short=AK {ECO:0000255|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000255|HAMAP-Rule:MF_00235};; ATP-AMP transphosphorylase {ECO:0000255|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000255|HAMAP-Rule:MF_00235}; TaxID=521460 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320); (Anaerocellum thermophilum).;"
Adenylate kinase n=2 Tax=Caldicellulosiruptor RepID=KAD_CALBD
adenylate kinase
L1_007_000M1_scaffold_1585_24
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

12366..13133
DNA (768bp) protein (256aa)
mapA; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974, ECO:0000313|EMBL:CCP24912.1}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974, ECO:0000313|EMBL:CCP24912.1};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
Methionine aminopeptidase n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LSV6_TEPAE
L1_007_000M1_scaffold_1585_25
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13168..13437
DNA (270bp) protein (90aa)
Putative ribosomal protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4W0N7_CLOBI
Putative ribosomal protein {ECO:0000313|EMBL:EQK46522.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
ribosomal protein
L1_007_000M1_scaffold_1585_26
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13443..13661
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=7 Tax=Clostridium thermocellum RepID=IF1_CLOTH
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L1_007_000M1_scaffold_1585_27
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

13707..14735
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6M3H4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB94183.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
L1_007_000M1_scaffold_1585_28
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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14881..14994
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CFF7_9CLOT
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
50S ribosomal protein L36
L1_007_000M1_scaffold_1585_29
Dethiosulfovibrio peptidovorans, Dethiosulfovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

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15117..15482
DNA (366bp) protein (122aa)
30S ribosomal protein S13 n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z938_9BACT
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=469381 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Dethiosulfovibrio.;" source="Dethiosulfovibrio peptidovorans DSM 11002.;"
rpsM; 30S ribosomal protein S13
L1_007_000M1_scaffold_1585_30
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15619..16011
DNA (393bp) protein (131aa)
30S ribosomal protein S11 n=1 Tax=Clostridium sp. JC122 RepID=UPI000288604C
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
Displaying items 1-30 of 34 in total

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