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L1_007_000M1_scaffold_1674

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1674_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..241
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BTN1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI75600.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L1_007_000M1_scaffold_1674_2
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

746..2209
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6RAM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC39966.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
hypothetical protein
L1_007_000M1_scaffold_1674_3
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2206..5316
DNA (3111bp) protein (1037aa)
Uncharacterized protein n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6RAM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC39966.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
hypothetical protein
L1_007_000M1_scaffold_1674_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5619..5918
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D7U8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI75596.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L1_007_000M1_scaffold_1674_5
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5942..7396
DNA (1455bp) protein (485aa)
MobA/MobL family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BTM5_9CLOT
MobA/MobL family protein {ECO:0000313|EMBL:ERI75595.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
plasmid mobilization system relaxase
L1_007_000M1_scaffold_1674_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7412..8047
DNA (636bp) protein (212aa)
CHC2 zinc finger domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BBT3_9CLOT
CHC2 zinc finger domain protein {ECO:0000313|EMBL:ERI75594.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
DNA primase
L1_007_000M1_scaffold_1674_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7992..9356
DNA (1365bp) protein (455aa)
Virulence-associated protein E n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BUV6_9CLOT
Virulence-associated protein E {ECO:0000313|EMBL:ERI75593.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Predicted P-loop ATPase and inactivated derivatives
L1_007_000M1_scaffold_1674_8
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9597..9791
DNA (195bp) protein (65aa)
DNA binding domain, excisionase family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D286_9CLOT
DNA binding domain, excisionase family {ECO:0000313|EMBL:ERI75592.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Excisionase from transposon Tn916.
L1_007_000M1_scaffold_1674_9
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9877..11076
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KP57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS48234.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
Site-specific recombinase XerD
L1_007_000M1_scaffold_1674_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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11286..11711
DNA (426bp) protein (142aa)
low molecular weight protein-tyrosine-phosphatase (EC:3.1.3.48)
Low molecular weight phosphotyrosine protein phosphatase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWL6_9FIRM
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:EHM38587.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L1_007_000M1_scaffold_1674_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11705..12709
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM38588.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L1_007_000M1_scaffold_1674_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13275..14870)
DNA (1596bp) protein (532aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X943_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48012.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Site-specific recombinase XerD
L1_007_000M1_scaffold_1674_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14875..15987)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X942_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48011.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative site-specific recombinase
L1_007_000M1_scaffold_1674_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16128..16442)
DNA (315bp) protein (105aa)
Sel1 repeat protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YT74_9FIRM
Sel1 repeat protein {ECO:0000313|EMBL:EHM44198.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L1_007_000M1_scaffold_1674_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16561..17880)
DNA (1320bp) protein (440aa)
Sel1 repeat protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YT74_9FIRM
Sel1 repeat protein {ECO:0000313|EMBL:EHM44198.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L1_007_000M1_scaffold_1674_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17868..18287)
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJ63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27659.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_000M1_scaffold_1674_17
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18607..19002)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09401.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L1_007_000M1_scaffold_1674_18
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19002..19439)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09400.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L1_007_000M1_scaffold_1674_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19436..19645)
DNA (210bp) protein (70aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBD5_9FIRM
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EGJ47663.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
DNA binding domain, excisionase family
L1_007_000M1_scaffold_1674_20
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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19765..22839
DNA (3075bp) protein (1025aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QYC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK62564.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L1_007_000M1_scaffold_1674_21
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22829..23731
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H2K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27716.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L1_007_000M1_scaffold_1674_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24272..26338)
DNA (2067bp) protein (689aa)
GAF modulated sigma54 specific transcriptional regulator, Fis family n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CJT9_DESK7
Uncharacterized protein {ECO:0000313|EMBL:KGF52982.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Fis family transcriptional regulator
L1_007_000M1_scaffold_1674_23
Bacillus okhensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26502..27785)
DNA (1284bp) protein (428aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Bacillus sp. L1(2012) RepID=UPI00034BB648
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KHF38741.1}; TaxID=333138 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus okhensis.;"
TRAP dicarboxylate transporter subunit DctM
L1_007_000M1_scaffold_1674_24
Halobacillus karajensis, Halobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27782..28309)
DNA (528bp) protein (176aa)
C4-dicarboxylate transport system small permease n=1 Tax=Planococcus antarcticus DSM 14505 RepID=I4X5Q0_9BACL
2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM {ECO:0000313|EMBL:CDQ23035.1}; TaxID=195088 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Halobacillus.;" source="Halobacillus karajensis.;"
C4-dicarboxylate ABC transporter, permease protein
L1_007_000M1_scaffold_1674_25
Planomicrobium glaciei, Planomicrobium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28355..29422)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Bacillus massiliosenegalensis RepID=UPI00037B38C7
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETP70395.1}; TaxID=1273538 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planomicrobium.;" source="Planomicrobium glaciei CHR43.;"
TRAP dicarboxylate transporter, dctp subunit
L1_007_000M1_scaffold_1674_26
bacterium UASB270, Bacteria

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30145..31191
DNA (1047bp) protein (349aa)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
Transaldolase id=4843146 bin=GWC2_Planctomycetes_45_44 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
transaldolase
L1_007_000M1_scaffold_1674_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31215..32267
DNA (1053bp) protein (351aa)
Putative chlorophyll synthesis pathway protein BchC n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D7Q5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54700.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
alcohol dehydrogenase GroES domain-containing protein
L1_007_000M1_scaffold_1674_28
unknown

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32415..32570
DNA (156bp) protein (52aa)

This feature has no annotations

L1_007_000M1_scaffold_1674_29
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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32647..33612
DNA (966bp) protein (322aa)
TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit n=2 Tax=Oscillibacter RepID=U2QT85_9FIRM
TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit {ECO:0000313|EMBL:ERK62847.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Pyruvate dehydrogenase subunit alpha
L1_007_000M1_scaffold_1674_30
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33627..34607
DNA (981bp) protein (327aa)
TPP-dependent acetoin dehydrogenase complex, E1 component, beta subunit n=2 Tax=Oscillibacter RepID=U2R1V3_9FIRM
TPP-dependent acetoin dehydrogenase complex, E1 component, beta subunit {ECO:0000313|EMBL:ERK62846.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
transketolase
Displaying items 1-30 of 32 in total

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