ggKbase home page

L1_007_000M1_scaffold_1708

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1708_1
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(176..1366)
DNA (1191bp) protein (397aa)
2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00985}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
2-amino-3-ketobutyrate coenzyme A ligase n=7 Tax=Bacteroides RepID=A6KZ11_BACV8
L1_007_000M1_scaffold_1708_2
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1537..2490
DNA (954bp) protein (318aa)
NAD dependent nucleotide-diphosphate-sugar epimerase n=7 Tax=Bacteroides RepID=A6KZ12_BACV8
NAD dependent nucleotide-diphosphate-sugar epimerase
NAD dependent nucleotide-diphosphate-sugar epimerase {ECO:0000313|EMBL:CDF18506.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_007_000M1_scaffold_1708_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2638..3684
DNA (1047bp) protein (349aa)
Kinase, PfkB family n=5 Tax=Bacteroides RepID=C6Z095_9BACE
PfkB carbohydrate kinase family protein {ECO:0000313|EMBL:KDS27987.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
gluconate kinase
L1_007_000M1_scaffold_1708_4
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3949..6936)
DNA (2988bp) protein (996aa)
Protein-export membrane protein SecD/SecF n=5 Tax=root RepID=A6KZ20_BACV8
bifunctional preprotein translocase subunit SecD/SecF
Export membrane protein SecD {ECO:0000313|EMBL:EET14312.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L1_007_000M1_scaffold_1708_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7115..9202)
DNA (2088bp) protein (696aa)
Peptidyl-dipeptidase n=4 Tax=Bacteroides RepID=A6KZ21_BACV8
Peptidyl-dipeptidase Dcp {ECO:0000313|EMBL:EOS02440.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
peptidyl-dipeptidase
L1_007_000M1_scaffold_1708_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9229..10308)
DNA (1080bp) protein (360aa)
Endonuclease/exonuclease/phosphatase family protein n=5 Tax=Bacteroides RepID=D4VAP1_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY78962.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_007_000M1_scaffold_1708_7
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10312..11205)
DNA (894bp) protein (298aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A6KZ23_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF18501.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_007_000M1_scaffold_1708_8
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11186..11863)
DNA (678bp) protein (226aa)
Peptidase, S54 family n=4 Tax=Bacteroides RepID=C6Z090_9BACE
transmembrane rhomboid family protein
Putative transmembrane rhomboid family protein {ECO:0000313|EMBL:CDF18500.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_007_000M1_scaffold_1708_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12074..12346
DNA (273bp) protein (91aa)
DNA-binding protein HU-beta n=7 Tax=Bacteroides RepID=A6KZ25_BACV8
DNA-binding protein HU-beta
DNA-binding protein HU-beta {ECO:0000313|EMBL:EOS02436.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000M1_scaffold_1708_10
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12439..15768
DNA (3330bp) protein (1110aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Uncharacterized protein n=2 Tax=root RepID=R7P2H8_9BACE
beta-galactosidase
L1_007_000M1_scaffold_1708_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15940..16410
DNA (471bp) protein (157aa)
Toxin-antitoxin system, toxin component, Fic family n=3 Tax=Bacteroides vulgatus RepID=D4VAN6_BACVU
DNA-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EIY78957.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_007_000M1_scaffold_1708_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16452..17468
DNA (1017bp) protein (339aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
tRNA-specific 2-thiouridylase MnmA n=3 Tax=Bacteroides RepID=D4VAN5_BACVU
mnmA; tRNA-specific 2-thiouridylase MnmA
L1_007_000M1_scaffold_1708_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17616..18101
DNA (486bp) protein (162aa)
Arylsulfatase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAN4_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS02432.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
arylsulfatase
L1_007_000M1_scaffold_1708_14
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18073..19179
DNA (1107bp) protein (369aa)
Arylsulfatase {ECO:0000313|EMBL:EET14303.1}; EC=3.1.6.- {ECO:0000313|EMBL:EET14303.1};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Arylsulfatase n=3 Tax=Bacteroides RepID=C6Z085_9BACE
arylsulfatase
L1_007_000M1_scaffold_1708_15
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19981..21960)
DNA (1980bp) protein (660aa)
Glycoside hydrolase family 51, candidate alpha-L-arabinofuranosidase n=5 Tax=root RepID=A6KZ30_BACV8
Alpha-N-arabinofuranosidase 1 family protein {ECO:0000313|EMBL:EET14302.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
alpha-L-arabinofuranosidase
Displaying 15 items

View Taxonomy