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L1_007_000M1_scaffold_1749

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1749_1
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..243
DNA (243bp) protein (81aa)
Site-specific recombinase, phage integrase family n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S210_9FIRM
integrase/recombinase XerD
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFF67712.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
L1_007_000M1_scaffold_1749_2
Fusobacterium sp. OBRC1, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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409..2157
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Streptococcus sp. C300 RepID=E9FJB3_9STRE
AAA domain protein {ECO:0000313|EMBL:EUB33070.1}; TaxID=1032505 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium sp. OBRC1.;"
L1_007_000M1_scaffold_1749_3
unknown

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2242..3162
DNA (921bp) protein (307aa)

This feature has no annotations

L1_007_000M1_scaffold_1749_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3366..3785
DNA (420bp) protein (140aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80424.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_007_000M1_scaffold_1749_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3962..4912
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80428.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_007_000M1_scaffold_1749_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4987..5781)
DNA (795bp) protein (265aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8C2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78574.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type uncharacterized transport system, ATPase component
L1_007_000M1_scaffold_1749_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5784..6701)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80430.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type uncharacterized transport system, permease component
L1_007_000M1_scaffold_1749_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6852..7838)
DNA (987bp) protein (329aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8C0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80432.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type uncharacterized transport system, periplasmic component
L1_007_000M1_scaffold_1749_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8102..8866
DNA (765bp) protein (255aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8B9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80433.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_007_000M1_scaffold_1749_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9134..9736
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8B8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78570.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_007_000M1_scaffold_1749_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9740..11023)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80436.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_007_000M1_scaffold_1749_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11368..12873
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CS08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80437.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_007_000M1_scaffold_1749_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12923..13273
DNA (351bp) protein (117aa)
TIGR04097 family integral membrane protein n=2 Tax=Ruminococcus RepID=C6J8B5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80438.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_007_000M1_scaffold_1749_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13347..13487
DNA (141bp) protein (47aa)
RSAM-modified six-cysteine peptide SCIFF n=2 Tax=Ruminococcus RepID=C6J8B4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80439.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_007_000M1_scaffold_1749_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13568..14935
DNA (1368bp) protein (456aa)
Six-Cys-in-45 modification radical SAM protein n=2 Tax=Ruminococcus RepID=C6J8B3_9FIRM
Six-Cys-in-45 modification radical SAM protein {ECO:0000313|EMBL:EES78565.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Arylsulfatase regulator (Fe-S oxidoreductase)
L1_007_000M1_scaffold_1749_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15047..17455
DNA (2409bp) protein (803aa)
Protein-export membrane protein SecD n=2 Tax=Ruminococcus RepID=C6J8B2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80441.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
protein translocase subunit secF/protein translocase subunit secD
L1_007_000M1_scaffold_1749_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17537..19249
DNA (1713bp) protein (571aa)
exonuclease RecJ (EC:3.1.-.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CS11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80442.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_007_000M1_scaffold_1749_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19397..19921
DNA (525bp) protein (175aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=2 Tax=Ruminococcus RepID=C6J8B0_9FIRM
L1_007_000M1_scaffold_1749_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19959..22106
DNA (2148bp) protein (716aa)
(p)ppGpp synthetase, RelA/SpoT family (EC:2.7.6.5)
RelA/SpoT family protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80448.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_007_000M1_scaffold_1749_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22171..22800
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78560.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Zn-dependent hydrolases, including glyoxylases
L1_007_000M1_scaffold_1749_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22793..24307
DNA (1515bp) protein (505aa)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases (EC:1.3.99.22)
Coproporphyrinogen dehydrogenase HemZ n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A7_9FIRM
Coproporphyrinogen dehydrogenase HemZ {ECO:0000313|EMBL:EES78559.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_000M1_scaffold_1749_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24325..24987
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78558.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
HD-GYP domain
L1_007_000M1_scaffold_1749_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24950..25765
DNA (816bp) protein (272aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine-tRNA ligase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A5_9FIRM
Histidine-tRNA ligase {ECO:0000313|EMBL:EES78557.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_000M1_scaffold_1749_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25705..26097
DNA (393bp) protein (131aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSM3_9FIRM
Histidyl tRNA synthetase suspected. See adjacent gene [L1_007_000M1_scaffold_1749_23].
Uncharacterized protein {ECO:0000313|EMBL:CDD80453.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_007_000M1_scaffold_1749_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


26194..27990
DNA (1797bp) protein (599aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A4_9FIRM
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:EES78556.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_000M1_scaffold_1749_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27993..28751
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78555.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted permeases
L1_007_000M1_scaffold_1749_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28919..30130)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78554.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_007_000M1_scaffold_1749_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30414..31892
DNA (1479bp) protein (493aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8A1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80460.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Membrane-fusion protein
L1_007_000M1_scaffold_1749_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31889..32560
DNA (672bp) protein (224aa)
ABC-type antimicrobial peptide transport system, ATPase component (EC:3.6.3.-)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8A0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78552.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_000M1_scaffold_1749_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32566..34587
DNA (2022bp) protein (674aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J899_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78551.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
Displaying items 1-30 of 36 in total

View Taxonomy