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L1_007_000M1_scaffold_1780

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1780_1
unknown

Not on your lists

comp(37..633)
DNA (597bp) protein (199aa)

This feature has no annotations

L1_007_000M1_scaffold_1780_2
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(775..2667)
DNA (1893bp) protein (631aa)
CRISPR-associated protein, Csd1 family n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDD9_9CLOT
CRISPR-associated protein, Csd1 family {ECO:0000313|EMBL:EEG30525.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Csd1 family CRISPR-associated protein
L1_007_000M1_scaffold_1780_3
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2670..3371)
DNA (702bp) protein (234aa)
CRISPR-associated protein cas5, subtype I-c/dvulg n=1 Tax=Dorea sp. 5-2 RepID=R9NN05_9FIRM
CRISPR-associated protein cas5, subtype I-c/dvulg {ECO:0000313|EMBL:EOS81387.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
CRISPR-associated protein
L1_007_000M1_scaffold_1780_4
unknown

Not on your lists

3605..3769
DNA (165bp) protein (55aa)

This feature has no annotations

L1_007_000M1_scaffold_1780_5
Shuttleworthia satelles, Shuttleworthia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5020..5868)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G806_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEP28830.1}; TaxID=626523 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Shuttleworthia.;" source="Shuttleworthia satelles DSM 14600.;"
protein Csd2 family protein
L1_007_000M1_scaffold_1780_6
unknown

Not on your lists

comp(6419..6886)
DNA (468bp) protein (156aa)

This feature has no annotations

L1_007_000M1_scaffold_1780_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7369..7686)
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JPX8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95147.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_1780_8
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7743..8645)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G9T8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB18021.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L1_007_000M1_scaffold_1780_9
unknown

Not on your lists

comp(8820..9395)
DNA (576bp) protein (192aa)

This feature has no annotations

L1_007_000M1_scaffold_1780_10
Jonquetella anthropi, Jonquetella, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(9526..9897)
DNA (372bp) protein (124aa)
DNA-binding helix-turn-helix protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9D2_9BACT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEX47776.1}; TaxID=645512 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Jonquetella.;" source="Jonquetella anthropi E3_33 E1.;"
HTH domain-containing protein
L1_007_000M1_scaffold_1780_11
unknown

Not on your lists

comp(9911..10144)
DNA (234bp) protein (78aa)

This feature has no annotations

L1_007_000M1_scaffold_1780_12
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10289..11092)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GVG0_SELRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL84747.1}; TaxID=927704 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 /; TAM6421).;"
L1_007_000M1_scaffold_1780_13
unknown

Not on your lists

comp(11148..11354)
DNA (207bp) protein (69aa)

This feature has no annotations

L1_007_000M1_scaffold_1780_14
unknown

Not on your lists

comp(12078..12548)
DNA (471bp) protein (157aa)

This feature has no annotations

L1_007_000M1_scaffold_1780_15
Eggerthella sp. CAG:1427, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12915..13451)
DNA (537bp) protein (179aa)
PF13274 family protein n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5FPU5_9ACTN
PF13274 family protein {ECO:0000313|EMBL:CCY05659.1}; TaxID=1262874 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:1427.;"
Phage protein
L1_007_000M1_scaffold_1780_16
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13501..13791)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N1ZYV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ21081.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
L1_007_000M1_scaffold_1780_17
unknown

Not on your lists

comp(14154..14336)
DNA (183bp) protein (61aa)

This feature has no annotations

L1_007_000M1_scaffold_1780_18
unknown

Not on your lists

comp(14660..14794)
DNA (135bp) protein (45aa)

This feature has no annotations

L1_007_000M1_scaffold_1780_19
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14818..15675)
DNA (858bp) protein (286aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
Ribonuclease H n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y409_9FIRM
rnhA; ribonuclease H
L1_007_000M1_scaffold_1780_20
unknown

Not on your lists

comp(15718..16044)
DNA (327bp) protein (109aa)

This feature has no annotations

L1_007_000M1_scaffold_1780_21
unknown

Not on your lists

comp(16078..16521)
DNA (444bp) protein (148aa)

This feature has no annotations

L1_007_000M1_scaffold_1780_22
unknown

Not on your lists

comp(16704..16976)
DNA (273bp) protein (91aa)

This feature has no annotations

L1_007_000M1_scaffold_1780_23
unknown

Not on your lists

comp(17142..17306)
DNA (165bp) protein (55aa)

This feature has no annotations

L1_007_000M1_scaffold_1780_24
unknown

Not on your lists

comp(17354..17533)
DNA (180bp) protein (60aa)

This feature has no annotations

L1_007_000M1_scaffold_1780_25
unknown

Not on your lists

comp(17766..18071)
DNA (306bp) protein (102aa)

This feature has no annotations

L1_007_000M1_scaffold_1780_26
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(18103..20037)
DNA (1935bp) protein (645aa)
ATP-dependent DNA helicase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z973_MELRP
ATP-dependent DNA helicase
Tax=GWB2_Ignavibacteria_35_6b_curated
L1_007_000M1_scaffold_1780_27
unknown

Not on your lists

comp(20576..20782)
DNA (207bp) protein (69aa)

This feature has no annotations

L1_007_000M1_scaffold_1780_28
unknown

Not on your lists

comp(21276..21593)
DNA (318bp) protein (106aa)

This feature has no annotations

L1_007_000M1_scaffold_1780_29
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21799..23316
DNA (1518bp) protein (506aa)
Probable transposase n=1 Tax=Coprococcus catus GD/7 RepID=D4J975_9FIRM
Probable transposase.
Probable transposase {ECO:0000313|EMBL:CBK80896.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L1_007_000M1_scaffold_1780_30
unknown

Not on your lists

comp(23485..23997)
DNA (513bp) protein (171aa)

This feature has no annotations

Displaying items 1-30 of 39 in total

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