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L1_007_000M1_scaffold_1871

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1871_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(151..945)
DNA (795bp) protein (265aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
thyA; thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=4 Tax=Bacteroides RepID=D4VCE8_BACVU
L1_007_000M1_scaffold_1871_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1027..1356)
DNA (330bp) protein (110aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L1Q9_BACV8
Uncharacterized protein {ECO:0000313|EMBL:KDS56530.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L1_007_000M1_scaffold_1871_3
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1340..1888)
DNA (549bp) protein (183aa)
RNA polymerase sigma factor n=14 Tax=Bacteroides RepID=A6L1R0_BACV8
RNA polymerase sigma70 factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
L1_007_000M1_scaffold_1871_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1891..2598)
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VCF1_BACVU
Putative uncharacterized protein {ECO:0000313|EMBL:EFG16464.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L1_007_000M1_scaffold_1871_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2730..4157
DNA (1428bp) protein (476aa)
NOL1/NOP2/sun family protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VCF2_BACVU
NOL1/NOP2/sun family protein {ECO:0000313|EMBL:EFG16465.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
tRNA and rRNA cytosine-C5-methylase
L1_007_000M1_scaffold_1871_6
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4128..4343)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=G1UM60_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGX27666.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L1_007_000M1_scaffold_1871_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4294..6435)
DNA (2142bp) protein (714aa)
DNA topoisomerase III family protein {ECO:0000313|EMBL:KDS56526.1}; EC=5.99.1.2 {ECO:0000313|EMBL:KDS56526.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
DNA topoisomerase n=2 Tax=Bacteroides vulgatus RepID=D4VCF3_BACVU
DNA topoisomerase
L1_007_000M1_scaffold_1871_8
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6709..7575
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NW34_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF16940.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L1_007_000M1_scaffold_1871_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7807..8181
DNA (375bp) protein (125aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L1R5_BACV8
Thioesterase superfamily protein {ECO:0000313|EMBL:KDS29609.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L1_007_000M1_scaffold_1871_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8365..10257)
DNA (1893bp) protein (631aa)
Putative helicase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L1R6_BACV8
Viral (Super1) RNA helicase family protein {ECO:0000313|EMBL:KDS29608.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
helicase
L1_007_000M1_scaffold_1871_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10429..12672
DNA (2244bp) protein (748aa)
Aconitate hydratase, mitochondrial {ECO:0000313|EMBL:KDS56522.1}; EC=4.2.1.3 {ECO:0000313|EMBL:KDS56522.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase n=2 Tax=Bacteroides RepID=C6Z500_9BACE
L1_007_000M1_scaffold_1871_12
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12676..13821
DNA (1146bp) protein (382aa)
Isocitrate dehydrogenase [NADP] n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NWA4_9BACE
Isocitrate dehydrogenase [NADP] {ECO:0000313|EMBL:CDF16936.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
isocitrate dehydrogenase
L1_007_000M1_scaffold_1871_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13834..15177
DNA (1344bp) protein (448aa)
citrate synthase (EC:2.3.3.1)
Citrate synthase n=8 Tax=root RepID=B6W0P2_9BACE
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_007_000M1_scaffold_1871_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14989..15660)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HQS4_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS03575.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L1_007_000M1_scaffold_1871_15
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15855..16316)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H058_BACVU
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EET15852.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L1_007_000M1_scaffold_1871_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16716..17708
DNA (993bp) protein (331aa)
Integrase family protein n=2 Tax=Bacteroides RepID=C3Q5N6_9BACE
Putative integrase protein {ECO:0000313|EMBL:KDS29601.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
putative bacteriophage integrase
L1_007_000M1_scaffold_1871_17
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17976..19364
DNA (1389bp) protein (463aa)
Putative uncharacterized protein n=1 Tax=Bacteroides dorei DSM 17855 RepID=B6W0N7_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB24405.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
hypothetical protein
L1_007_000M1_scaffold_1871_18
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19369..20229
DNA (861bp) protein (287aa)
DNA-methyltransferase n=3 Tax=Bacteroides RepID=Q8A0L0_BACTN
DNA-methyltransferase
Putative uncharacterized protein {ECO:0000313|EMBL:EEB24404.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L1_007_000M1_scaffold_1871_19
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20226..21791
DNA (1566bp) protein (522aa)
Putative ABC oligo/dipeptide transport, ATP-binding protein n=3 Tax=Bacteroides RepID=Q8A0K9_BACTN
Putative uncharacterized protein {ECO:0000313|EMBL:EEB24403.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
ABC oligo/dipeptide transport, ATP-binding protein
L1_007_000M1_scaffold_1871_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22196..22960
DNA (765bp) protein (255aa)
3-oxo-5-alpha-steroid 4-dehydrogenase n=5 Tax=Bacteroides RepID=A6L1S2_BACV8
3-oxo-5-alpha-steroid 4-dehydrogenase family protein {ECO:0000313|EMBL:KDS56512.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
3-oxo-5-alpha-steroid 4-dehydrogenase
L1_007_000M1_scaffold_1871_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23020..24246
DNA (1227bp) protein (409aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=I9A273_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY81452.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
NADH:flavin oxidoreductase
L1_007_000M1_scaffold_1871_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24243..25103
DNA (861bp) protein (287aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=8 Tax=root RepID=C6Z4Y9_9BACE
oxidoreductase
Short chain dehydrogenase family protein {ECO:0000313|EMBL:KDS56510.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_007_000M1_scaffold_1871_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25211..25570)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L1S5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39639.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Displaying 23 items

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