ggKbase home page

L1_007_000M1_scaffold_3

Search features with annotation key words

Displaying items 121-150 of 330 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_3_121
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

156917..157192
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y9B3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25256.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L1_007_000M1_scaffold_3_122
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(157194..160148)
DNA (2955bp) protein (985aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00036BD874
Conserved domain protein {ECO:0000313|EMBL:CDD25257.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_000M1_scaffold_3_123
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(160304..160705)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XNL9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25258.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_000M1_scaffold_3_124
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(160861..161622)
DNA (762bp) protein (254aa)
chemotaxis protein CheY n=1 Tax=Alistipes onderdonkii RepID=UPI00036B8E8C
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CDD25259.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
response regulator of the LytR/AlgR family
L1_007_000M1_scaffold_3_125
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(161619..162926)
DNA (1308bp) protein (436aa)
termination factor Rho n=1 Tax=Alistipes onderdonkii RepID=UPI00036C697B
Putative regulator of cell autolysis {ECO:0000313|EMBL:CDD25260.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
regulator of cell autolysis
L1_007_000M1_scaffold_3_126
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(162952..163485)
DNA (534bp) protein (178aa)
acetyltransferase n=1 Tax=Alistipes onderdonkii RepID=UPI000368C15D
Isoleucine patch superfamily enzyme carbonic anhydrase/acetyltransferase {ECO:0000313|EMBL:CDD25261.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
carbonic anhydrase/acetyltransferase
L1_007_000M1_scaffold_3_127
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(163591..164367)
DNA (777bp) protein (259aa)
Protein MazG n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z436_9BACT
Protein MazG {ECO:0000313|EMBL:CDD25262.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
MazG family protein
L1_007_000M1_scaffold_3_128
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

164534..166693
DNA (2160bp) protein (720aa)
Glycosyl hydrolase family 20 catalytic domain protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XNM4_9BACT
Glycosyl hydrolase family 20 catalytic domain protein {ECO:0000313|EMBL:CDD25263.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
N-acetyl-beta-hexosaminidase
L1_007_000M1_scaffold_3_129
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(166818..167468)
DNA (651bp) protein (217aa)
YhhN-like protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y1W4_9BACT
YhhN-like protein {ECO:0000313|EMBL:CDD25264.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
YjeF-like protein
L1_007_000M1_scaffold_3_130
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(167552..170017)
DNA (2466bp) protein (822aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
phenylalanyl-tRNA synthetase subunit beta n=1 Tax=Alistipes onderdonkii RepID=UPI00036864FF
L1_007_000M1_scaffold_3_131
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

170091..170201
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y9C1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25266.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L1_007_000M1_scaffold_3_132
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

170589..171950
DNA (1362bp) protein (454aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Tryptophan synthase beta chain n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z440_9BACT
pyridoxal-phosphate dependent TrpB-like protein
L1_007_000M1_scaffold_3_133
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(172099..172998)
DNA (900bp) protein (300aa)
EamA-like transporter family n=1 Tax=Alistipes sp. CAG:29 RepID=R6XNM8_9BACT
EamA-like transporter family {ECO:0000313|EMBL:CDD25268.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
EamA-like transporter family.
L1_007_000M1_scaffold_3_134
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(173182..174342)
DNA (1161bp) protein (387aa)
Diaminopimelate decarboxylase {ECO:0000256|RuleBase:RU003738}; EC=4.1.1.20 {ECO:0000256|RuleBase:RU003738};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Diaminopimelate decarboxylase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y1X0_9BACT
diaminopimelate decarboxylase
L1_007_000M1_scaffold_3_135
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(174391..175275)
DNA (885bp) protein (295aa)
4-hydroxybenzoate polyprenyltransferase (EC:2.5.1.39)
4-hydroxybenzoate polyprenyltransferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XUC9_9BACT
4-hydroxybenzoate polyprenyltransferase {ECO:0000313|EMBL:CDD25270.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L1_007_000M1_scaffold_3_136
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

175406..177196
DNA (1791bp) protein (597aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Elongation factor 4 n=2 Tax=Alistipes RepID=I3YQZ8_ALIFI
GTP-binding protein LepA
L1_007_000M1_scaffold_3_137
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

177210..179117
DNA (1908bp) protein (636aa)
AMP-forming long-chain acyl-CoA synthetase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z444_9BACT
AMP-forming long-chain acyl-CoA synthetase {ECO:0000313|EMBL:CDD25272.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
AMP-forming long-chain acyl-CoA synthetase
L1_007_000M1_scaffold_3_138
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(179435..179989)
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R6XNN3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25273.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_000M1_scaffold_3_139
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

180345..181472
DNA (1128bp) protein (376aa)
Putative acyltransferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y1X5_9BACT
Putative acyltransferase {ECO:0000313|EMBL:CDD25274.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
acyltransferase
L1_007_000M1_scaffold_3_140
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

181876..183369
DNA (1494bp) protein (498aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
glpK; glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XUD4_9BACT
L1_007_000M1_scaffold_3_141
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

183382..184125
DNA (744bp) protein (248aa)
MIP family channel protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y9D0_9BACT
MIP family channel protein {ECO:0000313|EMBL:CDD25276.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
major intrinsic protein
L1_007_000M1_scaffold_3_142
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

184518..185489
DNA (972bp) protein (324aa)
Site-specific recombinase XerD n=1 Tax=Alistipes sp. CAG:29 RepID=R6XNN8_9BACT
Site-specific recombinase XerD {ECO:0000313|EMBL:CDD25278.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
site-specific recombinase XerD
L1_007_000M1_scaffold_3_143
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

185911..186402
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000364ED13
Uncharacterized protein {ECO:0000313|EMBL:CDD25279.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_000M1_scaffold_3_144
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

186615..187787
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z455_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25282.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
outer membrane protein/peptidoglycan-associated (lipo)protein
L1_007_000M1_scaffold_3_145
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

187831..188112
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000367650A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL79422.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_007_000M1_scaffold_3_146
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

188167..188322
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y1Y6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25284.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_000M1_scaffold_3_147
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

188367..189719
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037B34C4
Putative lipoprotein {ECO:0000313|EMBL:CDD25285.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_000M1_scaffold_3_148
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

189791..189922
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y9E2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25286.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_000M1_scaffold_3_149
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

189953..192016
DNA (2064bp) protein (688aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000377E76B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL79426.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_007_000M1_scaffold_3_150
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

192378..194129
DNA (1752bp) protein (584aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Transcription termination factor Rho n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y1Z2_9BACT
transcription termination factor Rho
Displaying items 121-150 of 330 in total

View Taxonomy