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L1_007_000M1_scaffold_3

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Displaying items 1-30 of 330 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_3_1
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..639)
DNA (639bp) protein (213aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
glucose-1-phosphate thymidylyltransferase n=2 Tax=Alistipes onderdonkii RepID=UPI0003784336
glucose-1-phosphate thymidylyltransferase
L1_007_000M1_scaffold_3_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(652..2046)
DNA (1395bp) protein (465aa)
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y062_9BACT
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:CDD24659.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
undecaprenyl-phosphate glucose phosphotransferase
L1_007_000M1_scaffold_3_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2078..2683)
DNA (606bp) protein (202aa)
Transcription termination/antitermination factor NusG n=1 Tax=Alistipes sp. CAG:29 RepID=R6XSN8_9BACT
Transcription termination/antitermination factor NusG {ECO:0000313|EMBL:CDD24660.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
transcription antiterminator
L1_007_000M1_scaffold_3_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3102..4175)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y7L9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24661.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_000M1_scaffold_3_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4506..5696
DNA (1191bp) protein (397aa)
Saccharopine dehydrogenase-like oxidoreductase n=2 Tax=Alistipes RepID=R6Z2H3_9BACT
Saccharopine dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:CDD24662.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
saccharopine dehydrogenase-like oxidoreductase
L1_007_000M1_scaffold_3_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5865..6983
DNA (1119bp) protein (373aa)
OmpA family protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XLZ7_9BACT
OmpA family protein {ECO:0000313|EMBL:CDD24663.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
outer membrane protein/peptidoglycan-associated (lipo)protein
L1_007_000M1_scaffold_3_7
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7397..8527
DNA (1131bp) protein (377aa)
carboxynorspermidine decarboxylase (EC:4.1.1.-)
Carboxynorspermidine decarboxylase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y067_9BACT
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:CDD24664.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L1_007_000M1_scaffold_3_8
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8547..9839
DNA (1293bp) protein (431aa)
Cysteate synthase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XSP3_9BACT
Cysteate synthase {ECO:0000313|EMBL:CDD24665.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
cysteate synthase
L1_007_000M1_scaffold_3_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10144..12126
DNA (1983bp) protein (661aa)
Outer membrane cobalamin receptor protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y7M2_9BACT
Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:CDD24666.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
outer membrane cobalamin receptor protein
L1_007_000M1_scaffold_3_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12764..14461
DNA (1698bp) protein (566aa)
Glutamate formiminotransferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z2H6_9BACT
Glutamate formiminotransferase {ECO:0000313|EMBL:CDD24667.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
glutamate formiminotransferase
L1_007_000M1_scaffold_3_11
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14467..16488
DNA (2022bp) protein (674aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
urocanate hydratase (EC:4.2.1.49)
urocanate hydratase n=1 Tax=Alistipes onderdonkii RepID=UPI00036C5DF7
L1_007_000M1_scaffold_3_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16505..17986
DNA (1482bp) protein (494aa)
Histidine ammonia-lyase {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026}; EC=4.3.1.3 {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y071_9BACT
L1_007_000M1_scaffold_3_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17983..19224
DNA (1242bp) protein (414aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XSP8_9BACT
L1_007_000M1_scaffold_3_14
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19244..20347
DNA (1104bp) protein (368aa)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y7M7_9BACT
Peptide methionine sulfoxide reductase MsrA {ECO:0000313|EMBL:CDD24671.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase
L1_007_000M1_scaffold_3_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20648..21274)
DNA (627bp) protein (209aa)
Putative chloramphenicol O-acetyltransferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z2I0_9BACT
Putative chloramphenicol O-acetyltransferase {ECO:0000313|EMBL:CDD24672.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
acetyltransferase
L1_007_000M1_scaffold_3_16
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21286..22566)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XM08_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24673.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair
L1_007_000M1_scaffold_3_17
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22655..23107)
DNA (453bp) protein (151aa)
SOS response UmuD protein Serine peptidase MEROPS family S24 n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y076_9BACT
SOS response UmuD protein Serine peptidase MEROPS family S24 {ECO:0000313|EMBL:CDD24674.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Error-prone repair protein UmuD
L1_007_000M1_scaffold_3_18
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23184..24068
DNA (885bp) protein (295aa)
Putative membrane protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XSQ1_9BACT
Putative membrane protein {ECO:0000313|EMBL:CDD24675.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Predicted permease, DMT superfamily
L1_007_000M1_scaffold_3_19
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24215..25150
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003793DAB
Uncharacterized protein {ECO:0000313|EMBL:CDD24676.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_000M1_scaffold_3_20
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25147..25461)
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R6Z2I4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24677.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_000M1_scaffold_3_21
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25565..26725)
DNA (1161bp) protein (387aa)
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities n=1 Tax=Alistipes sp. CAG:29 RepID=R6XM12_9BACT
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities {ECO:0000313|EMBL:CDD24678.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
bifunctional beta-cystathionase/maltose regulon repressor
L1_007_000M1_scaffold_3_22
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27688..28224)
DNA (537bp) protein (179aa)
methyltransferase n=1 Tax=Alistipes onderdonkii RepID=UPI00036B4B95
RNA methyltransferase RsmD family {ECO:0000313|EMBL:CDD24680.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
N6-adenine-specific methylase
L1_007_000M1_scaffold_3_23
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28215..28826)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y7N5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24681.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_000M1_scaffold_3_24
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28804..29439)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z2I8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24682.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_000M1_scaffold_3_25
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29494..30909
DNA (1416bp) protein (472aa)
Uncharacterized P-loop hydrolase UPF0079 n=1 Tax=Alistipes sp. CAG:29 RepID=R6XM16_9BACT
Uncharacterized P-loop hydrolase UPF0079 {ECO:0000313|EMBL:CDD24683.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
P-loop hydrolase
L1_007_000M1_scaffold_3_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30902..31477
DNA (576bp) protein (192aa)
G:T/U mismatch-specific DNA glycosylase (EC:3.2.2.-)
DNA glycosylase n=1 Tax=Alistipes onderdonkii RepID=UPI0003762E75
G:T/U mismatch-specific DNA glycosylase {ECO:0000313|EMBL:CDD24684.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L1_007_000M1_scaffold_3_27
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31588..34266
DNA (2679bp) protein (893aa)
DNA mismatch repair protein MutS n=1 Tax=Alistipes sp. CAG:29 RepID=R6XSR1_9BACT
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
DNA mismatch repair protein MutS
L1_007_000M1_scaffold_3_28
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34263..35486
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y7P0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24686.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
KWG repeat-containing protein
L1_007_000M1_scaffold_3_29
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35801..36424)
DNA (624bp) protein (208aa)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
uridine kinase (EC:2.7.1.48)
Uridine kinase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z2J1_9BACT
L1_007_000M1_scaffold_3_30
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36499..38457)
DNA (1959bp) protein (653aa)
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
DNA-cytosine methyltransferase n=1 Tax=Alistipes senegalensis RepID=UPI00037C63DC
Displaying items 1-30 of 330 in total

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