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L1_007_000M1_scaffold_4

Search features with annotation key words

Displaying items 181-210 of 371 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_4_181
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

239148..239912
DNA (765bp) protein (255aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0XG63_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62905.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
chromosome partitioning protein ParA
L1_007_000M1_scaffold_4_182
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

239933..240811
DNA (879bp) protein (293aa)
ParB-like partition protein n=2 Tax=Bacteroidales RepID=K0X5E3_9PORP
ParB-like partition protein {ECO:0000313|EMBL:EJZ62904.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
chromosome partitioning protein ParB
L1_007_000M1_scaffold_4_183
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

240816..241640
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WU28_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62903.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein
L1_007_000M1_scaffold_4_184
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

241653..243122
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WUD6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62902.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
lytic transglycosylase
L1_007_000M1_scaffold_4_185
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(243082..243771)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F674_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX96277.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L1_007_000M1_scaffold_4_186
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(243795..244727)
DNA (933bp) protein (311aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F7T1_9BACE
GTPase RsgA
L1_007_000M1_scaffold_4_187
unknown

Not on your lists

comp(245369..245506)
DNA (138bp) protein (46aa)

This feature has no annotations

L1_007_000M1_scaffold_4_188
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(245955..246515)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X5D6_9PORP
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
frr; ribosome recycling factor
L1_007_000M1_scaffold_4_189
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(246602..247312)
DNA (711bp) protein (237aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=3 Tax=root RepID=K0WU21_9PORP
L1_007_000M1_scaffold_4_190
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(247495..249339)
DNA (1845bp) protein (615aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EUN3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX96273.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
L1_007_000M1_scaffold_4_191
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

249748..250641
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F7S6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX96271.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L1_007_000M1_scaffold_4_192
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(250627..251376)
DNA (750bp) protein (250aa)
Biotin-[acetyl-CoA-carboxylase] ligase n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X5D0_9PORP
Biotin-[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:EJZ62894.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
biotin--acetyl-CoA-carboxylase ligase
L1_007_000M1_scaffold_4_193
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(251358..251738)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EY84_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX96269.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L1_007_000M1_scaffold_4_194
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(251741..252112)
DNA (372bp) protein (124aa)
UPF0102 protein HMPREF9448_02246 n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WUC5_9PORP
UPF0102 protein HMPREF9448_02246 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein
L1_007_000M1_scaffold_4_195
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

252325..253029
DNA (705bp) protein (235aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0WX84_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX96267.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L1_007_000M1_scaffold_4_196
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

253116..253559
DNA (444bp) protein (148aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XG45_9PORP
CMP deaminase
L1_007_000M1_scaffold_4_197
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(253562..254545)
DNA (984bp) protein (328aa)
Putative membrane protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EU90_9BACE
Putative membrane protein {ECO:0000313|EMBL:CCX96265.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
membrane protein
L1_007_000M1_scaffold_4_198
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


254767..256560
DNA (1794bp) protein (598aa)
30S ribosomal protein S1 n=2 Tax=Bacteroidales RepID=K0WU08_9PORP
30S ribosomal protein S1 {ECO:0000313|EMBL:CCX96264.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
30S ribosomal protein S1
L1_007_000M1_scaffold_4_199
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

256685..257605
DNA (921bp) protein (307aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Ribonuclease Z n=2 Tax=Bacteroidales RepID=K0WUB9_9PORP
ribonuclease Z
L1_007_000M1_scaffold_4_200
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

257786..257986
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0WX81_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62886.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein
L1_007_000M1_scaffold_4_201
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

258117..258311
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XG40_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62885.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
iron-binding protein
L1_007_000M1_scaffold_4_202
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

258531..259721
DNA (1191bp) protein (397aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Phosphoribosylglycinamide formyltransferase 2 n=2 Tax=Bacteroidales RepID=K0X5B7_9PORP
purT; phosphoribosylglycinamide formyltransferase
L1_007_000M1_scaffold_4_203
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(259830..262562)
DNA (2733bp) protein (911aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EY75_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX96259.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
cbg; putative beta-glucosidase
L1_007_000M1_scaffold_4_204
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(262573..264636)
DNA (2064bp) protein (688aa)
Por secretion system C-terminal sorting domain-containing protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WUB3_9PORP
Por secretion system C-terminal sorting domain-containing protein {ECO:0000313|EMBL:EJZ62882.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein
L1_007_000M1_scaffold_4_205
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(264693..266852)
DNA (2160bp) protein (720aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WX75_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62881.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
alpha-glucosidase
L1_007_000M1_scaffold_4_206
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(266871..268073)
DNA (1203bp) protein (401aa)
Glycosyl hydrolase family 76 n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F7R1_9BACE
Glycosyl hydrolase family 76 {ECO:0000313|EMBL:CCX96256.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Predicted glycosyl hydrolase
L1_007_000M1_scaffold_4_207
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(268163..269263)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X5B1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62879.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein
L1_007_000M1_scaffold_4_208
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(269295..271247)
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WTZ5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62878.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
ragB/SusD family protein
L1_007_000M1_scaffold_4_209
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(271267..274599)
DNA (3333bp) protein (1111aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WUB0_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EJZ62877.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
Outer membrane receptor proteins, mostly Fe transport
L1_007_000M1_scaffold_4_210
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(274734..275759)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WX70_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62876.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
anti-FecI sigma factor, FecR
Displaying items 181-210 of 371 in total

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