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L1_007_000M1_scaffold_4

Search features with annotation key words

Displaying items 211-240 of 371 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_4_211
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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275995..276546
DNA (552bp) protein (184aa)
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XG29_9PORP
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EJZ62875.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L1_007_000M1_scaffold_4_212
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

276745..278352
DNA (1608bp) protein (536aa)
Por secretion system C-terminal sorting domain-containing protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X5A5_9PORP
Por secretion system C-terminal sorting domain-containing protein {ECO:0000313|EMBL:EJZ62874.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
L1_007_000M1_scaffold_4_213
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

278386..280884
DNA (2499bp) protein (833aa)
Alpha-glucosidase n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F4Z1_9BACE
Alpha-glucosidase {ECO:0000313|EMBL:CCX95842.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
susB; alpha-glucosidase-like protein
L1_007_000M1_scaffold_4_214
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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280921..282285
DNA (1365bp) protein (455aa)
Conserved domain protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F6J5_9BACE
Conserved domain protein {ECO:0000313|EMBL:CCX95841.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
L1_007_000M1_scaffold_4_215
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

282293..282409
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ET37_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95840.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
L1_007_000M1_scaffold_4_216
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

282406..283608
DNA (1203bp) protein (401aa)
Putative alpha-1 6-mannanase n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EWY0_9BACE
Putative alpha-1 6-mannanase {ECO:0000313|EMBL:CCX95839.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Predicted glycosyl hydrolase
L1_007_000M1_scaffold_4_217
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(283751..285535)
DNA (1785bp) protein (595aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ETE8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95838.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
L1_007_000M1_scaffold_4_218
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

285728..288508
DNA (2781bp) protein (927aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F4Y5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95837.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
TonB-dependent receptor plug
L1_007_000M1_scaffold_4_219
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

288527..289816
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F6J0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95836.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
lipoprotein
L1_007_000M1_scaffold_4_220
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

289831..291360
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WU98_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62867.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein
L1_007_000M1_scaffold_4_221
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

292157..293038
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EWX4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95834.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
transcriptional regulator
L1_007_000M1_scaffold_4_222
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


293204..293539
DNA (336bp) protein (112aa)
50S ribosomal protein L21 n=2 Tax=Bacteroidales RepID=K0XG18_9PORP
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
50S ribosomal protein L21
L1_007_000M1_scaffold_4_223
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


293561..293824
DNA (264bp) protein (88aa)
50S ribosomal protein L27 n=2 Tax=Bacteroidales RepID=K0X594_9PORP
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
50S ribosomal protein L27
L1_007_000M1_scaffold_4_224
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(294650..294817)
DNA (168bp) protein (56aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0WTX4_9PORP
Ferredoxin 4Fe-4S {ECO:0000313|EMBL:CCX95831.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
ferredoxin 4Fe-4S
L1_007_000M1_scaffold_4_225
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

294981..295748
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ET25_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95830.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
porT protein
L1_007_000M1_scaffold_4_226
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(295736..298714)
DNA (2979bp) protein (993aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EWW6_9BACE
hypothetical protein
L1_007_000M1_scaffold_4_227
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(298721..299494)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ETD8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95828.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
5'-nucleotidase
L1_007_000M1_scaffold_4_228
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(299508..300383)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F4X3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95827.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
5'-nucleotidase
L1_007_000M1_scaffold_4_229
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


300635..300982
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=2 Tax=Bacteroidales RepID=K0WTW8_9PORP
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
50S ribosomal protein L19
L1_007_000M1_scaffold_4_230
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(301256..303625)
DNA (2370bp) protein (790aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ET20_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95825.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
L1_007_000M1_scaffold_4_231
Prevotella amnii, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

303794..304621
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Prevotella amnii RepID=UPI00037E6EB7
Uncharacterized protein {ECO:0000313|EMBL:EFN90330.1}; TaxID=679191 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella amnii CRIS 21A-A.;"
L1_007_000M1_scaffold_4_232
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

304650..306581
DNA (1932bp) protein (644aa)
Putative uncharacterized protein n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EL38_CORAD
Ig-like domain-containing surface protein
Uncharacterized protein {ECO:0000313|EMBL:ADE53140.1}; TaxID=583355 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193; / KCTC 12865).;"
L1_007_000M1_scaffold_4_233
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

307006..308520
DNA (1515bp) protein (505aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XG06_9PORP
phosphoglyceromutase
L1_007_000M1_scaffold_4_234
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

308591..309199
DNA (609bp) protein (203aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0X587_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX95822.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L1_007_000M1_scaffold_4_235
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

309189..310529
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F6H4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95821.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
multidrug transporter MatE
L1_007_000M1_scaffold_4_236
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

310728..311618
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WU81_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62852.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein
L1_007_000M1_scaffold_4_237
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

311808..312269
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WX48_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62851.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
DoxX family protein
L1_007_000M1_scaffold_4_238
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

312316..313377
DNA (1062bp) protein (354aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XG00_9PORP
trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
L1_007_000M1_scaffold_4_239
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

313636..314220
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F4W2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95817.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L1_007_000M1_scaffold_4_240
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

314410..315642
DNA (1233bp) protein (411aa)
Nucleoside transporter n=2 Tax=Bacteroidales RepID=K0WTV8_9PORP
Nucleoside transporter {ECO:0000313|EMBL:CCX95816.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
nucleoside permease
Displaying items 211-240 of 371 in total

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