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L1_007_000M1_scaffold_4

Search features with annotation key words

Displaying items 241-270 of 371 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_4_241
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

315660..316373
DNA (714bp) protein (238aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ET08_9BACE
16S rRNA methyltransferase
L1_007_000M1_scaffold_4_242
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

316373..317200
DNA (828bp) protein (276aa)
3-deoxy-8-phosphooctulonate synthase n=2 Tax=Bacteroidales RepID=K0WX44_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX95814.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
2-dehydro-3-deoxyphosphogluconate aldolase
L1_007_000M1_scaffold_4_243
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

317221..318819
DNA (1599bp) protein (533aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0XFZ6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX95813.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L1_007_000M1_scaffold_4_244
unknown

Not on your lists

comp(318846..318989)
DNA (144bp) protein (48aa)

This feature has no annotations

L1_007_000M1_scaffold_4_245
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(319140..319601)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X580_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62844.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
L1_007_000M1_scaffold_4_246
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(320240..321169)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WTV3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62843.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein
L1_007_000M1_scaffold_4_247
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(321433..323529)
DNA (2097bp) protein (699aa)
ATP-dependent DNA helicase RecG n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ET02_9BACE
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:CCX95810.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
ATP-dependent DNA helicase RecG
L1_007_000M1_scaffold_4_248
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(323526..324194)
DNA (669bp) protein (223aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EWU2_9BACE
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L1_007_000M1_scaffold_4_249
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(324533..328447)
DNA (3915bp) protein (1305aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XFY8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62840.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein
L1_007_000M1_scaffold_4_250
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(328982..329731)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F6F9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95806.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
UDP-2,3-diacylglucosamine hydrolase
L1_007_000M1_scaffold_4_251
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(329739..330050)
DNA (312bp) protein (104aa)
FeS assembly SUF system protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ESZ5_9BACE
FeS assembly SUF system protein {ECO:0000313|EMBL:CCX95805.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
FeS assembly SUF system protein
L1_007_000M1_scaffold_4_252
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

330250..330870
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WU60_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62837.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein
L1_007_000M1_scaffold_4_253
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

331362..332090
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ETB3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95803.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
L1_007_000M1_scaffold_4_254
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

332125..333831
DNA (1707bp) protein (569aa)
Rhs family protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F4U3_9BACE
Rhs family protein {ECO:0000313|EMBL:CCX95802.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
surface/cell-adhesion protein
L1_007_000M1_scaffold_4_255
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

334084..336549
DNA (2466bp) protein (822aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Primosomal protein N n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F6F2_9BACE
primosomal protein N'
L1_007_000M1_scaffold_4_256
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

336581..337669
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ESZ0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95800.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hydrolase
L1_007_000M1_scaffold_4_257
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(337736..338479)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X574_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62834.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
acylhydrolase
L1_007_000M1_scaffold_4_258
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(338510..339790)
DNA (1281bp) protein (427aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ETA8_9BACE
L1_007_000M1_scaffold_4_259
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(339814..340503)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F4T7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95797.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L1_007_000M1_scaffold_4_260
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(340514..341080)
DNA (567bp) protein (189aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F6E7_9BACE
Flavin reductase domain protein FMN-binding protein {ECO:0000313|EMBL:CCX95796.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
flavin reductase
L1_007_000M1_scaffold_4_261
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(341093..341554)
DNA (462bp) protein (154aa)
Aspartate carbamoyltransferase regulatory chain n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ESY5_9BACE
Aspartate carbamoyltransferase regulatory chain {ECO:0000256|HAMAP-Rule:MF_00002}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
aspartate carbamoyltransferase
L1_007_000M1_scaffold_4_262
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(341576..342490)
DNA (915bp) protein (305aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Aspartate carbamoyltransferase n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EWT1_9BACE
aspartate carbamoyltransferase catalytic subunit
L1_007_000M1_scaffold_4_263
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(342556..342711)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WTT6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62828.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
L1_007_000M1_scaffold_4_264
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

342841..345204
DNA (2364bp) protein (788aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WU46_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62827.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
penicillin-binding protein 1A
L1_007_000M1_scaffold_4_265
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(345265..345858)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F6E0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95791.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L1_007_000M1_scaffold_4_266
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(345855..346142)
DNA (288bp) protein (96aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0XFX3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX95790.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L1_007_000M1_scaffold_4_267
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(346169..346897)
DNA (729bp) protein (243aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0X567_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX95789.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L1_007_000M1_scaffold_4_268
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

347034..348890
DNA (1857bp) protein (619aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WTT1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62823.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
carboxylase
L1_007_000M1_scaffold_4_269
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


349074..349325
DNA (252bp) protein (84aa)
50S ribosomal protein L31 type B n=2 Tax=Bacteroidales RepID=K0WU41_9PORP
rpmE2; 50S ribosomal protein L31
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
L1_007_000M1_scaffold_4_270
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

349491..349871
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WU30_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62812.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
DeoR family transcriptional regulator
Displaying items 241-270 of 371 in total

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