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L1_007_000M1_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 479 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_5_1
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(122..1435)
DNA (1314bp) protein (438aa)
Transposase IS30 family n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9H1_9CLOT
Transposase IS30 family {ECO:0000313|EMBL:CDD73988.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
transposase and inactivated derivatives IS30 family-like protein
L1_007_000M1_scaffold_5_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1721..2713
DNA (993bp) protein (331aa)
Phage-related regulatory protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3H8_9FIRM
Phage-related regulatory protein {ECO:0000313|EMBL:CCZ77946.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Phage-related regulatory protein
L1_007_000M1_scaffold_5_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2713..3585
DNA (873bp) protein (291aa)
Sir2-like protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIU2_9FIRM
Sir2-like protein {ECO:0000313|EMBL:CCZ77945.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_5_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3744..4031
DNA (288bp) protein (96aa)
Sporulation initiation inhibitor protein Soj n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQ96_9FIRM
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:CCZ77944.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ATPases involved in chromosome partitioning
L1_007_000M1_scaffold_5_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4009..4365
DNA (357bp) protein (119aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UI56_9FIRM
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:CCZ77943.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Transposase and inactivated derivatives
L1_007_000M1_scaffold_5_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4497..6011
DNA (1515bp) protein (505aa)
Divergent AAA domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VB52_9FIRM
Divergent AAA domain protein {ECO:0000313|EMBL:CCZ77942.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative transcriptional regulator with HTH domain
L1_007_000M1_scaffold_5_7
unknown

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6275..6385
DNA (111bp) protein (37aa)

This feature has no annotations

L1_007_000M1_scaffold_5_8
unknown

Not on your lists

6366..6485
DNA (120bp) protein (40aa)

This feature has no annotations

L1_007_000M1_scaffold_5_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6516..7070
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3H3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77941.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_5_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7246..7512
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KBL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ89637.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_5_11
Firmicutes bacterium CAG:536, Firmicutes, Bacteria

Not on your lists

7651..8343
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002DFA45C
Putative DNA alkylation repair enzyme {ECO:0000313|EMBL:CDA34406.1}; TaxID=1263028 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:536.;"
putative DNA alkylation repair enzyme
L1_007_000M1_scaffold_5_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8364..8987
DNA (624bp) protein (208aa)
HNH endonuclease n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAW5_9FIRM
HNH endonuclease {ECO:0000313|EMBL:CCZ77862.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
HNH endonuclease.
L1_007_000M1_scaffold_5_13
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9048..9671
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YHP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24284.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
dihydroorotate dehydrogenase
L1_007_000M1_scaffold_5_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9679..10122
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V390_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77861.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_5_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10127..10396
DNA (270bp) protein (90aa)
Putative efflux protein MATE family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UII6_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CCZ77860.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative efflux protein, MATE family
L1_007_000M1_scaffold_5_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10399..10821
DNA (423bp) protein (141aa)
Putative efflux protein MATE family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQ01_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CCZ77859.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative efflux protein, MATE family
L1_007_000M1_scaffold_5_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11135..12034
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77858.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_5_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12098..12286)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77857.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_5_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12304..13491)
DNA (1188bp) protein (396aa)
Sodium/glutamate symporter n=1 Tax=Roseburia sp. CAG:18 RepID=R5V387_9FIRM
Sodium/glutamate symporter {ECO:0000313|EMBL:CCZ77856.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sodium--glutamate symport carrier (gltS)
L1_007_000M1_scaffold_5_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13512..14465)
DNA (954bp) protein (318aa)
TRAP transporter solute receptor TAXI family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UII0_9FIRM
TRAP transporter solute receptor TAXI family {ECO:0000313|EMBL:CCZ77855.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
TRAP transporter solute receptor, TAXI family
L1_007_000M1_scaffold_5_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15019..16431
DNA (1413bp) protein (471aa)
anthranilate synthase, component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPZ5_9FIRM
Anthranilate synthase component I {ECO:0000313|EMBL:CCZ77854.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_5_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16428..16997
DNA (570bp) protein (190aa)
Anthranilate synthase component II n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHW3_9FIRM
Anthranilate synthase component II {ECO:0000313|EMBL:CCZ77853.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
anthranilate synthase component II
L1_007_000M1_scaffold_5_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17091..17876
DNA (786bp) protein (262aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAV3_9FIRM
L1_007_000M1_scaffold_5_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17873..18538
DNA (666bp) protein (222aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V384_9FIRM
hypothetical protein
L1_007_000M1_scaffold_5_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18535..19722
DNA (1188bp) protein (396aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
tryptophan synthase, beta chain (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIH7_9FIRM
L1_007_000M1_scaffold_5_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19739..20533
DNA (795bp) protein (265aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPZ1_9FIRM
L1_007_000M1_scaffold_5_27
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20567..21577
DNA (1011bp) protein (337aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YBA0_9FIRM
L1_007_000M1_scaffold_5_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21772..23697
DNA (1926bp) protein (642aa)
pullulanase, type I (EC:3.2.1.41)
Pullulanase type I n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAU6_9FIRM
Pullulanase type I {ECO:0000313|EMBL:CCZ77842.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_5_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23678..24937)
DNA (1260bp) protein (420aa)
Chloride channel protein EriC n=1 Tax=Roseburia sp. CAG:18 RepID=R5V376_9FIRM
Chloride channel protein EriC {ECO:0000313|EMBL:CCZ77841.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Chloride channel protein EriC
L1_007_000M1_scaffold_5_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25059..26642
DNA (1584bp) protein (528aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIG8_9FIRM
Displaying items 1-30 of 479 in total

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