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L1_007_000M1_scaffold_35

Search features with annotation key words

Displaying items 61-90 of 227 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_35_61
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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75990..76826
DNA (837bp) protein (279aa)
ABC-type Mn2+/Zn2+ transport systems permease components n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DMS5_9FIRM
ABC-type Mn2+/Zn2+ transport systems, permease components
ABC-type Mn2+/Zn2+ transport systems permease components {ECO:0000313|EMBL:CCX81545.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_35_62
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(76830..77210)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DYA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81547.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_35_63
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(77215..77931)
DNA (717bp) protein (239aa)
Predicted membrane protein n=2 Tax=Ruminococcus RepID=D4L8S0_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL16015.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_35_64
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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77965..79419
DNA (1455bp) protein (485aa)
Bacillus/Clostridium GerA spore germination protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8R9_9FIRM
Bacillus/Clostridium GerA spore germination protein.
Bacillus/Clostridium GerA spore germination protein {ECO:0000313|EMBL:CBL16014.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_35_65
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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79419..80486
DNA (1068bp) protein (356aa)
Spore germination protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DMZ0_9FIRM
Spore germination protein {ECO:0000313|EMBL:CCX81553.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Spore germination protein.
L1_007_000M1_scaffold_35_66
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

80479..81069
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8R7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL16012.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_35_67
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

81244..82212
DNA (969bp) protein (323aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Hpr(Ser) kinase/phosphatase (EC:2.7.1.- 2.7.4.- 2.7.11.-)
HPr kinase/phosphorylase n=3 Tax=root RepID=R5E038_9FIRM
L1_007_000M1_scaffold_35_68
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

82281..83186
DNA (906bp) protein (302aa)
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8R5_9FIRM
L1_007_000M1_scaffold_35_69
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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83206..84069
DNA (864bp) protein (288aa)
UPF0042 nucleotide-binding protein RBR_18450 n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8R4_9FIRM
Predicted P-loop-containing kinase
Nucleotide-binding protein RBR_18450 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_35_70
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

84079..85014
DNA (936bp) protein (312aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R5E042_9FIRM
hypothetical protein
Putative sporulation transcription regulator WhiA {ECO:0000256|SAAS:SAAS00015186}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_35_71
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

85004..85228
DNA (225bp) protein (75aa)
Exonuclease VII small subunit. (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Exodeoxyribonuclease 7 small subunit n=2 Tax=Ruminococcus RepID=D4L8R2_9FIRM
L1_007_000M1_scaffold_35_72
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

85221..86096
DNA (876bp) protein (292aa)
GGPPS1; Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic (EC:2.5.1.-)
Polyprenyl synthetase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DMU0_9FIRM
Polyprenyl synthetase {ECO:0000313|EMBL:CCX81565.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_35_73
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

86136..88007
DNA (1872bp) protein (624aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DYB8_9FIRM
L1_007_000M1_scaffold_35_74
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

88009..88815
DNA (807bp) protein (269aa)
Hemolysin TlyA family protein n=2 Tax=Ruminococcus RepID=D4L8R0_9FIRM
hemolysin TlyA family protein
Hemolysin TlyA family protein {ECO:0000313|EMBL:CBL16005.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_35_75
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

88828..89685
DNA (858bp) protein (286aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Predicted sugar kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DYC2_9FIRM
L1_007_000M1_scaffold_35_76
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

89685..90131
DNA (447bp) protein (149aa)
Arginine repressor n=2 Tax=Ruminococcus RepID=D4L8Q8_9FIRM
transcriptional regulator, ArgR family
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_35_77
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

90146..91813
DNA (1668bp) protein (556aa)
DNA repair protein RecN n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E053_9FIRM
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
DNA repair protein RecN
L1_007_000M1_scaffold_35_78
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

91834..92103
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DN11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81578.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_35_79
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

92096..92317
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DS05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81579.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_35_80
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

92320..92598
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E057_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81581.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_35_81
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

92634..94676
DNA (2043bp) protein (681aa)
recJ; single-stranded-DNA-specific exonuclease (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=2 Tax=root RepID=R5DN15_9FIRM
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:CCX81583.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_35_82
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

94676..96874
DNA (2199bp) protein (733aa)
(P)ppGpp synthetase, RelA/SpoT family {ECO:0000313|EMBL:CBL16002.1}; EC=2.7.6.5 {ECO:0000313|EMBL:CBL16002.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
(p)ppGpp synthetase, RelA/SpoT family (EC:2.7.6.5)
(P)ppGpp synthetase, RelA/SpoT family n=2 Tax=Ruminococcus RepID=D4L8Q7_9FIRM
L1_007_000M1_scaffold_35_83
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

96890..97345
DNA (456bp) protein (152aa)
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8Q6_9FIRM
L1_007_000M1_scaffold_35_84
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

97342..97968
DNA (627bp) protein (209aa)
Zn-dependent hydrolases including glyoxylases n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DS13_9FIRM
Zn-dependent hydrolases including glyoxylases {ECO:0000313|EMBL:CCX81589.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Zn-dependent hydrolases, including glyoxylases
L1_007_000M1_scaffold_35_85
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

97970..99409
DNA (1440bp) protein (480aa)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases (EC:1.3.99.22)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E066_9FIRM
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases {ECO:0000313|EMBL:CCX81591.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_35_86
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

99556..99951
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R5DN23_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15998.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_35_87
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

99976..101832
DNA (1857bp) protein (619aa)
Polysaccharide biosynthesis protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DS18_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CCX81594.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Polysaccharide biosynthesis protein
L1_007_000M1_scaffold_35_88
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

101911..102711
DNA (801bp) protein (267aa)
MazG family protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8Q2_9FIRM
MazG family protein
MazG family protein {ECO:0000313|EMBL:CBL15997.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_35_89
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

102728..103003
DNA (276bp) protein (92aa)
Bacterial nucleoid protein Hbs n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8Q1_9FIRM
bacterial nucleoid protein Hbs
Bacterial nucleoid protein Hbs {ECO:0000313|EMBL:CBL15996.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_35_90
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

103092..103334
DNA (243bp) protein (81aa)
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) n=2 Tax=Ruminococcus RepID=D4L8Q0_9FIRM
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) {ECO:0000313|EMBL:CBL15995.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Displaying items 61-90 of 227 in total

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