name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L1_007_000M1_scaffold_35_1
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(1..411)
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Transporter n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8Y5_9FIRM
Na+-dependent transporters of the SNF family
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
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L1_007_000M1_scaffold_35_2
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(589..2673)
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Type II secretory pathway, pullulanase PulA and related glycosidases (EC:3.2.1.-)
Type II secretory pathway, pullulanase PulA and related glycosidases {ECO:0000313|EMBL:CBL16075.1}; EC=3.2.1.- {ECO:0000313|EMBL:CBL16075.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Type II secretory pathway, pullulanase PulA and related glycosidases n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8Y0_9FIRM
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L1_007_000M1_scaffold_35_3 |
Not on your lists |
comp(2890..4584)
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Carbohydrate-active enzyme n=1 Tax=uncultured organism RepID=D9ZE49_9ZZZZ
Carbohydrate-active enzyme {ECO:0000313|EMBL:ADD61603.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Glycosidases
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L1_007_000M1_scaffold_35_4
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
4755..5246
|
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R5DMG3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL16073.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
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L1_007_000M1_scaffold_35_5 |
Not on your lists |
comp(5408..6415)
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Uncharacterized protein n=2 Tax=root RepID=R5DZM7_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61605.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
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L1_007_000M1_scaffold_35_6
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
6610..6975
|
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8X7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL16072.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
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L1_007_000M1_scaffold_35_7
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
7120..7626
|
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DMJ0_9FIRM
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L1_007_000M1_scaffold_35_8 |
Not on your lists |
7629..8231
|
Holliday junction ATP-dependent DNA helicase RuvA n=3 Tax=root RepID=D4L8X6_9FIRM
Holliday junction DNA helicase, RuvA subunit
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61608.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
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L1_007_000M1_scaffold_35_9 |
Not on your lists |
8235..9323
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Holliday junction ATP-dependent DNA helicase RuvB n=3 Tax=root RepID=R5DMG8_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61609.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Holliday junction DNA helicase, RuvB subunit
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L1_007_000M1_scaffold_35_10 |
Not on your lists |
9443..10792
|
phosphoglucosamine mutase (EC:5.4.2.10)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZE56_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61610.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
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L1_007_000M1_scaffold_35_11 |
Not on your lists |
10792..11655
|
Predicted SAM-dependent methyltransferases n=3 Tax=root RepID=D4L8X3_9FIRM
Predicted SAM-dependent methyltransferases
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61611.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
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L1_007_000M1_scaffold_35_12
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
11659..12504
|
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
ABC-type cobalt transport system, ATPase component n=2 Tax=Ruminococcus RepID=D4L8X2_9FIRM
ABC-type cobalt transport system, ATPase component
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L1_007_000M1_scaffold_35_13
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
12501..13370
|
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
ABC-type cobalt transport system ATPase component n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DZP2_9FIRM
ABC-type cobalt transport system, ATPase component
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L1_007_000M1_scaffold_35_14
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
13364..14176
|
ABC-type cobalt transport system permease component CbiQ and related transporters n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DMK1_9FIRM
ABC-type cobalt transport system permease component CbiQ and related transporters {ECO:0000313|EMBL:CCX81443.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
ABC-type cobalt transport system, permease component CbiQ and related transporters
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L1_007_000M1_scaffold_35_15
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
14146..14946
|
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DMH7_9FIRM
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L1_007_000M1_scaffold_35_16
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
14946..16241
|
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8W8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL16063.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
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L1_007_000M1_scaffold_35_17
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
16247..16921
|
Putative colicin V production protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRL8_9FIRM
Putative colicin V production protein {ECO:0000313|EMBL:CCX81449.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Colicin V production protein.
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L1_007_000M1_scaffold_35_18
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
16946..17563
|
Phosphatidylglycerophosphate synthase (EC:2.7.8.5)
Phosphatidylglycerophosphate synthase {ECO:0000313|EMBL:CBL16062.1}; EC=2.7.8.5 {ECO:0000313|EMBL:CBL16062.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Phosphatidylglycerophosphate synthase n=2 Tax=Ruminococcus RepID=D4L8W7_9FIRM
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L1_007_000M1_scaffold_35_19
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
17666..20005
|
ATPases with chaperone activity, ATP-binding subunit n=2 Tax=root RepID=D4L8W6_9FIRM
ATPases with chaperone activity, ATP-binding subunit {ECO:0000313|EMBL:CBL16061.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
ATPases with chaperone activity, ATP-binding subunit
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L1_007_000M1_scaffold_35_20
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(20358..21236)
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Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=2 Tax=Ruminococcus RepID=D4L8W5_9FIRM
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL16060.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
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L1_007_000M1_scaffold_35_21
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(21236..22114)
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Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8W4_9FIRM
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL16059.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
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L1_007_000M1_scaffold_35_22
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(22201..23556)
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Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRN2_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CCX81459.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
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L1_007_000M1_scaffold_35_23
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
23923..24783
|
Predicted integral membrane protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DMJ3_9FIRM
Predicted integral membrane protein {ECO:0000313|EMBL:CCX81460.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Predicted integral membrane protein
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L1_007_000M1_scaffold_35_24 |
Not on your lists |
25410..25802
|
Predicted transcriptional regulators n=3 Tax=root RepID=D4L8W1_9FIRM
Predicted transcriptional regulators
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EKC63508.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
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L1_007_000M1_scaffold_35_25
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
25942..26205
|
30S ribosomal protein S15 n=3 Tax=root RepID=D4L8W0_9FIRM
SSU ribosomal protein S15P
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
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L1_007_000M1_scaffold_35_26
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
26432..28651
|
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DMM1_9FIRM
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L1_007_000M1_scaffold_35_27
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
28920..30086
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Uncharacterized flavoproteins n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8V6_9FIRM
Uncharacterized flavoproteins
Uncharacterized flavoproteins {ECO:0000313|EMBL:CBL16051.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
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L1_007_000M1_scaffold_35_28
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
31109..32980
|
Fibronectin type III domain n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DML2_9FIRM
Fibronectin type III domain {ECO:0000313|EMBL:CCX81480.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Chitin binding protein
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L1_007_000M1_scaffold_35_29
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
32922..43721
|
Fibronectin type III domain n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DML2_9FIRM
Fibronectin type III domain {ECO:0000313|EMBL:CCX81480.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Fibronectin type III domain.
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L1_007_000M1_scaffold_35_30
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
44258..44746
|
Transcriptional regulators similar to M. xanthus CarD n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DML5_9FIRM
Transcriptional regulators, similar to M. xanthus CarD
Transcriptional regulators similar to M. xanthus CarD {ECO:0000313|EMBL:CCX81485.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
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