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L1_007_000M1_scaffold_39

Search features with annotation key words

Displaying items 1-30 of 159 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_39_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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122..910
DNA (789bp) protein (263aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Imidazole glycerol phosphate synthase subunit HisH n=3 Tax=Parabacteroides RepID=A7AJF6_9PORP
hisH; imidazole glycerol phosphate synthase subunit HisH
L1_007_000M1_scaffold_39_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

917..1636
DNA (720bp) protein (240aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=Parabacteroides RepID=A7AJF5_9PORP
imidazole-4-carboxamide isomerase
L1_007_000M1_scaffold_39_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1655..2410
DNA (756bp) protein (252aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Imidazole glycerol phosphate synthase subunit HisF n=3 Tax=Parabacteroides RepID=A7AJF4_9PORP
imidazole glycerol phosphate synthase subunit HisF
L1_007_000M1_scaffold_39_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2566..3162
DNA (597bp) protein (199aa)
Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y586_9PORP
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase
L1_007_000M1_scaffold_39_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3168..3845
DNA (678bp) protein (226aa)
ABC transporter, ATP-binding protein n=4 Tax=Parabacteroides RepID=A7AJF2_9PORP
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN85121.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ATP-binding protein involved in cell division
L1_007_000M1_scaffold_39_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3910..5229
DNA (1320bp) protein (440aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Aspartokinase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WW79_9PORP
aspartokinase
L1_007_000M1_scaffold_39_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5406..6566
DNA (1161bp) protein (387aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Diaminopimelate decarboxylase n=2 Tax=Parabacteroides RepID=K5ZR84_9PORP
diaminopimelate decarboxylase
L1_007_000M1_scaffold_39_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6746..7924
DNA (1179bp) protein (393aa)
Glycosyltransferase, group 2 family protein n=2 Tax=Parabacteroides RepID=A7AJE7_9PORP
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDD13558.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycosyl transferase family protein
L1_007_000M1_scaffold_39_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7957..9201)
DNA (1245bp) protein (415aa)
Efflux ABC transporter, permease protein n=3 Tax=Parabacteroides RepID=A7AJE6_9PORP
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDN85115.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transmembrane permease
L1_007_000M1_scaffold_39_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9267..10466)
DNA (1200bp) protein (400aa)
aspartate aminotransferase (EC:2.6.1.1)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5YDA1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11452.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L1_007_000M1_scaffold_39_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10576..11475)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WW75_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13555.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_39_12
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11614..11970)
DNA (357bp) protein (119aa)
Uncharacterized protein n=7 Tax=Parabacteroides RepID=A7AJE3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76303.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L1_007_000M1_scaffold_39_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12281..12811)
DNA (531bp) protein (177aa)
6-O-methylguanine DNA methyltransferase, DNA binding domain protein n=2 Tax=Parabacteroides RepID=A7AJE2_9PORP
6-O-methylguanine DNA methyltransferase, DNA binding domain protein {ECO:0000313|EMBL:EDN85111.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
cysteine methyltransferase
L1_007_000M1_scaffold_39_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12819..13994)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y581_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13552.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
transmembrane transport protein
L1_007_000M1_scaffold_39_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14000..15883)
DNA (1884bp) protein (628aa)
ABC transporter ATP-binding protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XB48_9PORP
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD13551.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ABC transporter ATP-binding protein
L1_007_000M1_scaffold_39_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16167..17597
DNA (1431bp) protein (477aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6BMW2_9PORP
Citrate transporter {ECO:0000313|EMBL:CDD13550.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Na+/H+ antiporter NhaD-like protein
L1_007_000M1_scaffold_39_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17643..18278
DNA (636bp) protein (212aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AJD7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85106.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_39_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18291..18647
DNA (357bp) protein (119aa)
Transcriptional regulator Spx/MgsR family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WQI6_9PORP
Transcriptional regulator Spx/MgsR family {ECO:0000313|EMBL:CDD13548.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ArsC family protein
L1_007_000M1_scaffold_39_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18647..19240
DNA (594bp) protein (198aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AJD5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13547.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_39_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19275..20777)
DNA (1503bp) protein (501aa)
Glutamate--ammonia ligase catalytic domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XB45_9PORP
Glutamate--ammonia ligase catalytic domain protein {ECO:0000313|EMBL:CDD13546.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glutamine synthetase
L1_007_000M1_scaffold_39_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21037..21372)
DNA (336bp) protein (112aa)
DNA-binding helix-turn-helix protein n=3 Tax=Parabacteroides RepID=A7AJD3_9PORP
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDD13545.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_39_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21563..21667)
DNA (105bp) protein (35aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5Z790_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13544.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_39_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21708..24791
DNA (3084bp) protein (1028aa)
SusC/RagA family TonB-linked outer membrane protein n=3 Tax=Parabacteroides RepID=K6B084_9PORP
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDD13543.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
TonB-linked outer membrane protein, SusC/RagA family
L1_007_000M1_scaffold_39_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24804..26738
DNA (1935bp) protein (645aa)
SusD family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y574_9PORP
SusD family protein {ECO:0000313|EMBL:CDD13542.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
SusD family protein
L1_007_000M1_scaffold_39_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27183..27566
DNA (384bp) protein (128aa)
Putative DNA-binding protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XB40_9PORP
Putative DNA-binding protein {ECO:0000313|EMBL:CDD13541.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_39_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27604..29691
DNA (2088bp) protein (696aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZJH8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11435.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L1_007_000M1_scaffold_39_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29965..31131
DNA (1167bp) protein (389aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Parabacteroides merdae RepID=A7AJC7_9PORP
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EDN85096.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
oxidoreductase
L1_007_000M1_scaffold_39_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31164..34262
DNA (3099bp) protein (1033aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Beta galactosidase small chain n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WQH9_9PORP
putative exported beta-galactosidase
L1_007_000M1_scaffold_39_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34479..36059
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YD85_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11432.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L1_007_000M1_scaffold_39_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36095..37480
DNA (1386bp) protein (462aa)
Tat pathway signal sequence domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y544_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDD13497.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
dehydrogenase exo-alpha-sialidase
Displaying items 1-30 of 159 in total

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