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L1_007_000M1_scaffold_43

Search features with annotation key words

Displaying items 1-30 of 152 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_43_1
unknown

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comp(1..258)
DNA (258bp) protein (86aa)

This feature has no annotations

L1_007_000M1_scaffold_43_2
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(410..2311)
DNA (1902bp) protein (634aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q799_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32568.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L1_007_000M1_scaffold_43_3
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

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comp(2471..3448)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BIL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD65630.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
L1_007_000M1_scaffold_43_4
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3704..4516
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QNE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32406.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
alpha-1,6-glucosidase
L1_007_000M1_scaffold_43_5
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4516..4986
DNA (471bp) protein (157aa)
C_GCAxxG_C_C family protein n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NR53_9FIRM
C_GCAxxG_C_C family protein {ECO:0000313|EMBL:CDF15131.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
C_GCAxxG_C_C family probable redox protein
L1_007_000M1_scaffold_43_6
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5583..6977)
DNA (1395bp) protein (465aa)
Mg2+ transporter (MgtE) n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QPC0_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
Mg2+ transporter (mgtE)
L1_007_000M1_scaffold_43_7
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7307..7792)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QJ36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32979.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
HD domain.
L1_007_000M1_scaffold_43_8
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8111..8827)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L355_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67472.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L1_007_000M1_scaffold_43_9
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8921..10603)
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L355_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67472.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L1_007_000M1_scaffold_43_10
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10855..11688)
DNA (834bp) protein (278aa)
Putative glycerophosphoryl diester phosphodiesterase n=1 Tax=Clostridium sp. CAG:678 RepID=R5KJF4_9CLOT
Putative glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CCY66903.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
L1_007_000M1_scaffold_43_11
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11784..13256)
DNA (1473bp) protein (491aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QHF2_9FIRM
L1_007_000M1_scaffold_43_12
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13357..15234)
DNA (1878bp) protein (626aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IPL8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51220.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Bacterial Ig-like domain (group 2)./Fibronectin type III domain.
L1_007_000M1_scaffold_43_13
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15257..15763)
DNA (507bp) protein (169aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
Shikimate kinase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q6R8_9FIRM
shikimate kinase
L1_007_000M1_scaffold_43_14
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15763..16395)
DNA (633bp) protein (211aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RD40_9FIRM
L1_007_000M1_scaffold_43_15
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16408..17676)
DNA (1269bp) protein (423aa)
Recombination protein MgsA n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QNF8_9FIRM
Recombination protein MgsA {ECO:0000313|EMBL:CDC32416.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
Recombination protein MgsA
L1_007_000M1_scaffold_43_16
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17696..18304)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XEW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA13415.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
conserved hypothetical protein
L1_007_000M1_scaffold_43_17
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

comp(18323..19708)
DNA (1386bp) protein (462aa)
Peptidase M23 family n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BKE8_9FIRM
Peptidase M23 family {ECO:0000313|EMBL:CDD65618.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
metalloendopeptidase-like membrane protein
L1_007_000M1_scaffold_43_18
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19842..21284)
DNA (1443bp) protein (481aa)
Peptidase M23 n=1 Tax=Clostridium sp. CAG:217 RepID=R6IXN9_9CLOT
Peptidase M23 {ECO:0000313|EMBL:CDB51214.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
cell wall-binding protein
L1_007_000M1_scaffold_43_19
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

comp(21481..22410)
DNA (930bp) protein (310aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
Cysteine synthase n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BCR3_9FIRM
cysteine synthase A
L1_007_000M1_scaffold_43_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22609..22806)
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IDF2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60487.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L1_007_000M1_scaffold_43_21
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


22988..23416
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Clostridium sp. CAG:217 RepID=R6JM55_9CLOT
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
50S ribosomal protein L13
L1_007_000M1_scaffold_43_22
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23432..23830
DNA (399bp) protein (133aa)
30S ribosomal protein S9 n=1 Tax=Clostridium sp. CAG:217 RepID=R6J071_9CLOT
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
SSU ribosomal protein S9P
L1_007_000M1_scaffold_43_23
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24355..24645
DNA (291bp) protein (97aa)
Putative ribonuclease inhibitor YrdF n=1 Tax=Roseburia sp. CAG:197 RepID=R5YGX9_9FIRM
Putative ribonuclease inhibitor YrdF {ECO:0000313|EMBL:CDA26160.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Barstar
L1_007_000M1_scaffold_43_24
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24860..26110)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NY24_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11181.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
Ig-like domain-containing surface protein
L1_007_000M1_scaffold_43_25
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26110..27912)
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NRZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11179.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L1_007_000M1_scaffold_43_26
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

28129..29289
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BEK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD64206.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
cation diffusion facilitator family transporter
L1_007_000M1_scaffold_43_27
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29310..31667
DNA (2358bp) protein (786aa)
beta-mannosidase (EC:3.2.1.25)
Beta-mannosidase n=1 Tax=Clostridium sp. CAG:678 RepID=R5KMI8_9CLOT
Beta-mannosidase {ECO:0000313|EMBL:CCY68020.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
L1_007_000M1_scaffold_43_28
unknown

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31685..32041
DNA (357bp) protein (119aa)

This feature has no annotations

L1_007_000M1_scaffold_43_29
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32485..33885
DNA (1401bp) protein (467aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q9Z5_9FIRM
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:CDC32620.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
sugar (glycoside-Pentoside-Hexuronide) transporter
L1_007_000M1_scaffold_43_30
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33907..35235
DNA (1329bp) protein (443aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QP30_9FIRM
carboxylesterase type b
Displaying items 1-30 of 152 in total

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