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L1_007_000M1_scaffold_54

Search features with annotation key words

Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_54_1
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3..134
DNA (132bp) protein (44aa)
Serine type site-specific recombinase n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EU95_9BACE
Serine type site-specific recombinase {ECO:0000313|EMBL:CCX94914.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
serine type site-specific recombinase
L1_007_000M1_scaffold_54_2
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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170..1204
DNA (1035bp) protein (345aa)
Acyl-CoA reductase (LuxC) n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JHU8_9BACT
Acyl-CoA reductase (LuxC) {ECO:0000313|EMBL:CDE63509.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
NAD-dependent aldehyde dehydrogenase
L1_007_000M1_scaffold_54_3
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1275..2048)
DNA (774bp) protein (258aa)
S1/P1 Nuclease. (EC:3.1.30.-)
S1/P1 Nuclease n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JI07_9BACT
S1/P1 Nuclease {ECO:0000313|EMBL:CDE63510.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L1_007_000M1_scaffold_54_4
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2062..3663)
DNA (1602bp) protein (534aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Transcription termination factor Rho n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JIF6_9BACT
transcription termination factor Rho
L1_007_000M1_scaffold_54_5
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4150..5052)
DNA (903bp) protein (301aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
tRNA dimethylallyltransferase n=2 Tax=Alistipes RepID=B0MYD4_9BACT
tRNA isopentenyltransferase MiaA
L1_007_000M1_scaffold_54_6
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5045..5545)
DNA (501bp) protein (167aa)
Uncharacterized protein n=3 Tax=root RepID=B0MYD3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63513.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Plasmid pRiA4b ORF-3-like protein
L1_007_000M1_scaffold_54_7

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comp(5660..6472)
DNA (813bp) protein (271aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EKC56202.1}; EC=2.-.-.- {ECO:0000313|EMBL:EKC56202.1};; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Phosphomethylpyrimidine kinase n=3 Tax=root RepID=B0MYD2_9BACT
phosphomethylpyrimidine kinase
L1_007_000M1_scaffold_54_8
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6524..7174)
DNA (651bp) protein (217aa)
TENA/THI-4 family protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JI13_9BACT
TENA/THI-4 family protein {ECO:0000313|EMBL:CDE63515.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
putative transcription activator
L1_007_000M1_scaffold_54_9
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7184..7882)
DNA (699bp) protein (233aa)
Methyltransferase domain protein n=2 Tax=Alistipes RepID=B0MYD0_9BACT
Methyltransferase domain protein {ECO:0000313|EMBL:CDE63516.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L1_007_000M1_scaffold_54_10
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7908..8603)
DNA (696bp) protein (232aa)
ThiF family protein n=2 Tax=Alistipes RepID=B0MYC9_9BACT
ThiF family protein {ECO:0000313|EMBL:CDE63517.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
molybdopterin biosynthesis protein
L1_007_000M1_scaffold_54_11
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8606..9715)
DNA (1110bp) protein (370aa)
Thiazole biosynthesis protein ThiH n=2 Tax=Alistipes RepID=B0MYC8_9BACT
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:CDE63518.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
thiH; thiamine biosynthesis protein ThiH
L1_007_000M1_scaffold_54_12
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9728..10495)
DNA (768bp) protein (256aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Thiazole synthase n=4 Tax=root RepID=B0MYC7_9BACT
thiazole synthase
L1_007_000M1_scaffold_54_13
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10492..11118)
DNA (627bp) protein (209aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Thiamine-phosphate synthase n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JI17_9BACT
thiamine-phosphate pyrophosphorylase
L1_007_000M1_scaffold_54_14
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11329..11919)
DNA (591bp) protein (197aa)
Thiamine monophosphate synthase/TENI n=3 Tax=root RepID=B0MYC4_9BACT
Thiamine monophosphate synthase/TENI {ECO:0000313|EMBL:EDS02502.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hydrogenase
L1_007_000M1_scaffold_54_15
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11916..12116)
DNA (201bp) protein (67aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JKS3_9BACT
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:CDE63522.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
thiamine biosynthesis protein ThiS
L1_007_000M1_scaffold_54_16
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12581..12913)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JHW2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63524.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L1_007_000M1_scaffold_54_17
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12971..13387
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JI21_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63525.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L1_007_000M1_scaffold_54_18
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14004..15908)
DNA (1905bp) protein (635aa)
Long-chain acyl-CoA synthetases (AMP-forming) (EC:6.2.1.3)
AMP-binding enzyme n=3 Tax=root RepID=B0MYB9_9BACT
AMP-binding enzyme {ECO:0000313|EMBL:EDS02497.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L1_007_000M1_scaffold_54_19
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15911..17701)
DNA (1791bp) protein (597aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Elongation factor 4 n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JKT1_9BACT
GTP-binding protein LepA
L1_007_000M1_scaffold_54_20
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17727..18734
DNA (1008bp) protein (336aa)
Putative 4-hydroxybenzoate polyprenyltransferase {ECO:0000313|EMBL:EDS02495.1}; EC=2.5.1.- {ECO:0000313|EMBL:EDS02495.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
4-hydroxybenzoate polyprenyltransferase (EC:2.5.1.39)
Putative 4-hydroxybenzoate polyprenyltransferase n=2 Tax=root RepID=B0MYB7_9BACT
L1_007_000M1_scaffold_54_21
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


18795..21266
DNA (2472bp) protein (824aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MYB6_9BACT
L1_007_000M1_scaffold_54_22
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21339..21677
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JI25_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63530.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L1_007_000M1_scaffold_54_23
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21774..23519)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JIH8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63531.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L1_007_000M1_scaffold_54_24
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23964..24752
DNA (789bp) protein (263aa)
MazG family protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MYB1_9BACT
MazG family protein {ECO:0000313|EMBL:EDS02489.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
MazG family protein
L1_007_000M1_scaffold_54_25
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24777..25307
DNA (531bp) protein (177aa)
Bacterial transferase hexapeptide repeat protein n=2 Tax=Alistipes RepID=B0MYB0_9BACT
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:CDE63533.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
carbonic anhydrase/acetyltransferase
L1_007_000M1_scaffold_54_26

Not on your lists

25389..25871
DNA (483bp) protein (161aa)
Uncharacterized protein n=3 Tax=root RepID=B0MYA9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKC72541.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_000M1_scaffold_54_27
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26013..28946
DNA (2934bp) protein (978aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JI28_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63535.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L1_007_000M1_scaffold_54_28
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29192..29629)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JII3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63536.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L1_007_000M1_scaffold_54_29
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29660..30859)
DNA (1200bp) protein (400aa)
ABC-2 type transporter n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JKU1_9BACT
ABC-2 type transporter {ECO:0000313|EMBL:CDE63537.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
multidrug ABC transporter permease
L1_007_000M1_scaffold_54_30
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30862..32040)
DNA (1179bp) protein (393aa)
ABC-2 type transporter n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JIU1_9BACT
ABC-2 type transporter {ECO:0000313|EMBL:CDE63538.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
ABC-type multidrug transport system, permease component
Displaying items 1-30 of 119 in total

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