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L1_007_000M1_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 135 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_56_1
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1..1029
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J973_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB46842.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
glgX; glycogen debranching protein
L1_007_000M1_scaffold_56_2
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1011..1697
DNA (687bp) protein (229aa)
Holo-ACP synthase malonate decarboxylase-specific n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IN81_9FIRM
Holo-ACP synthase malonate decarboxylase-specific {ECO:0000313|EMBL:CDB46841.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
holo-ACP synthase, malonate decarboxylase-specific
L1_007_000M1_scaffold_56_3
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1701..1910
DNA (210bp) protein (70aa)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IC63_9FIRM
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:CDB46840.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
biotin/lipoyl attachment domain-containing protein
L1_007_000M1_scaffold_56_4
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1997..2404
DNA (408bp) protein (136aa)
Malonate transporter MadL subunit n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IK63_9FIRM
Malonate transporter MadL subunit {ECO:0000313|EMBL:CDB46839.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
putative malonate transporter, MadL subunit
L1_007_000M1_scaffold_56_5
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2379..3146
DNA (768bp) protein (256aa)
Malonate transporter MadM subunit n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I9C6_9FIRM
Malonate transporter MadM subunit {ECO:0000313|EMBL:CDB46838.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
malonate transporter, MadM subunit
L1_007_000M1_scaffold_56_6
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3178..4131
DNA (954bp) protein (318aa)
Triphosphoribosyl-dephospho-CoA synthase {ECO:0000256|SAAS:SAAS00100821}; EC=2.4.2.52 {ECO:0000256|SAAS:SAAS00100821};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
citG; triphosphoribosyl-dephospho-CoA synthase (EC:2.7.8.25)
Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J966_9FIRM
L1_007_000M1_scaffold_56_7
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4272..5231
DNA (960bp) protein (320aa)
Auxin Efflux Carrier n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IN76_9FIRM
Auxin Efflux Carrier {ECO:0000313|EMBL:CDB46836.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
auxin Efflux Carrier
L1_007_000M1_scaffold_56_8
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5247..5684
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IC56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB46835.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
thioesterase superfamily protein
L1_007_000M1_scaffold_56_9
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5878..7179
DNA (1302bp) protein (434aa)
GMP synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00008728}; EC=6.3.5.2 {ECO:0000256|SAAS:SAAS00008728};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IK56_9FIRM
GMP synthase
L1_007_000M1_scaffold_56_10
unknown

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7643..7885
DNA (243bp) protein (81aa)

This feature has no annotations

L1_007_000M1_scaffold_56_11
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7879..8169
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BML5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO83236.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
putative site-specific recombinase
L1_007_000M1_scaffold_56_12
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8263..8535
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036866A0
Uncharacterized protein {ECO:0000313|EMBL:EHO83236.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
L1_007_000M1_scaffold_56_13
unknown

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8688..8990
DNA (303bp) protein (101aa)

This feature has no annotations

L1_007_000M1_scaffold_56_14
Paenibacillus sp. HGF5, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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9201..10661
DNA (1461bp) protein (487aa)
Conserved domain protein n=1 Tax=Paenibacillus sp. HGF5 RepID=F3M268_9BACL
Conserved domain protein {ECO:0000313|EMBL:EGG38453.1}; TaxID=908341 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF5.;"
hypothetical protein
L1_007_000M1_scaffold_56_15
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10654..11736
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Saccharibacillus kuerlensis RepID=UPI00035CAF18
Uncharacterized protein {ECO:0000313|EMBL:CCY92033.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L1_007_000M1_scaffold_56_16
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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11829..12380
DNA (552bp) protein (184aa)
Putative uncharacterized protein id=3419866 bin=GWF2_Clostridiales_38_85 species=Clostridium citroniae genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
type II restriction-modification enzyme
Tax=GWF2_Clostridiales_38_85_curated
L1_007_000M1_scaffold_56_17
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

12377..13579
DNA (1203bp) protein (401aa)
Putative uncharacterized protein id=3419866 bin=GWF2_Clostridiales_38_85 species=Clostridium citroniae genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
type II restriction-modification enzyme
Tax=GWF2_Clostridiales_38_85_curated
L1_007_000M1_scaffold_56_18
Helicobacter hepaticus, Helicobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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13807..14379
DNA (573bp) protein (191aa)
Type I restriction/modification enzyme n=1 Tax=Helicobacter hepaticus (strain ATCC 51449 / 3B1) RepID=Q7VG88_HELHP
type I restriction/modification enzyme
Type I restriction/modification enzyme {ECO:0000313|EMBL:AAP78031.1}; TaxID=235279 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter.;" source="Helicobacter hepaticus (strain ATCC 51449 / 3B1).;"
L1_007_000M1_scaffold_56_19
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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14395..14670
DNA (276bp) protein (92aa)
Putative uncharacterized protein id=4183117 bin=GWF2_Clostridiales_38_85 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein
Tax=GWF2_Clostridiales_38_85_curated
L1_007_000M1_scaffold_56_20
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14977..15861
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZP48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM88644.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L1_007_000M1_scaffold_56_21
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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16255..17028
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J961_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB46832.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L1_007_000M1_scaffold_56_22
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17331..17903
DNA (573bp) protein (191aa)
DNA-3-methyladenine glycosylase I n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KC74_9FIRM
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:EGN39526.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
DNA-3-methyladenine glycosylase I
L1_007_000M1_scaffold_56_23
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18435..20042
DNA (1608bp) protein (536aa)
Hemolysin activation/secretion protein family protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IG03_9FIRM
Hemolysin activation/secretion protein family protein {ECO:0000313|EMBL:CDB45479.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Polypeptide-transport-associated domain protein ShlB-type
L1_007_000M1_scaffold_56_24
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20087..22987
DNA (2901bp) protein (967aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I814_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45480.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hemagglutination domain protein
L1_007_000M1_scaffold_56_25
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23077..24027)
DNA (951bp) protein (317aa)
Renal dipeptidase family protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IC39_9FIRM
Renal dipeptidase family protein {ECO:0000313|EMBL:CDB46820.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Zn-dependent dipeptidase
L1_007_000M1_scaffold_56_26
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24098..25471)
DNA (1374bp) protein (458aa)
Transporter anaerobic C4-dicarboxylate uptake C family n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IK37_9FIRM
Transporter anaerobic C4-dicarboxylate uptake C family {ECO:0000313|EMBL:CDB46819.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
anaerobic c4-dicarboxylate antiporter, DcuC family
L1_007_000M1_scaffold_56_27
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25685..26584)
DNA (900bp) protein (300aa)
Sirohydrochlorin cobaltochelatase (EC:4.99.1.3)
Putative sirohydrochlorin cobaltochelatase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I9B1_9FIRM
Putative sirohydrochlorin cobaltochelatase {ECO:0000313|EMBL:CDB46818.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L1_007_000M1_scaffold_56_28
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27009..27713)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J945_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB46817.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L1_007_000M1_scaffold_56_29
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27738..28106)
DNA (369bp) protein (123aa)
Iron dependent repressor DNA binding domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IN55_9FIRM
Iron dependent repressor DNA binding domain protein {ECO:0000313|EMBL:CDB46816.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
DtxR family transcriptional regulator
L1_007_000M1_scaffold_56_30
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28307..28798)
DNA (492bp) protein (164aa)
Protein BioX n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IC33_9FIRM
Protein BioX {ECO:0000313|EMBL:CDB46815.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
Displaying items 1-30 of 135 in total

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