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L1_007_000M1_scaffold_67

Search features with annotation key words

Displaying items 31-60 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_67_31
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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35624..36487
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DXW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83769.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
polysaccharide deacetylase
L1_007_000M1_scaffold_67_32
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36491..38104)
DNA (1614bp) protein (538aa)
O-Antigen ligase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E6K4_9FIRM
O-Antigen ligase {ECO:0000313|EMBL:CCX83771.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
O-Antigen ligase.
L1_007_000M1_scaffold_67_33
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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38411..39061
DNA (651bp) protein (217aa)
Predicted phosphatases (EC:3.1.3.18)
Predicted phosphatases {ECO:0000313|EMBL:CBL16260.1}; EC=3.1.3.18 {ECO:0000313|EMBL:CBL16260.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Predicted phosphatases n=2 Tax=Ruminococcus RepID=D4L9G5_9FIRM
L1_007_000M1_scaffold_67_34
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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39629..41293
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N3I4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC02849.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
sig2; RNA polymerase sigma factor
L1_007_000M1_scaffold_67_35
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42568..44445)
DNA (1878bp) protein (626aa)
LPS biosynthesis protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DZ36_9FIRM
LPS biosynthesis protein {ECO:0000313|EMBL:CCX81266.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
LPS biosynthesis protein
L1_007_000M1_scaffold_67_36
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(44445..45539)
DNA (1095bp) protein (365aa)
Nucleoside-diphosphate-sugar epimerases (EC:4.2.1.46)
Nucleoside-diphosphate-sugar epimerases {ECO:0000313|EMBL:CBL16187.1}; EC=4.2.1.46 {ECO:0000313|EMBL:CBL16187.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Nucleoside-diphosphate-sugar epimerases n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L992_9FIRM
L1_007_000M1_scaffold_67_37
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45611..46357)
DNA (747bp) protein (249aa)
ABC-type polysaccharide/polyol phosphate transport system, ATPase component n=2 Tax=Ruminococcus RepID=D4L991_9FIRM
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
ABC-type polysaccharide/polyol phosphate transport system, ATPase component {ECO:0000313|EMBL:CBL16186.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_67_38
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46370..47191)
DNA (822bp) protein (274aa)
Putative ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DR27_9FIRM
Putative ABC transporter permease protein {ECO:0000313|EMBL:CCX81269.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
tagG; ABC transporter membrane component, teichoic acid transport
L1_007_000M1_scaffold_67_39
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47565..48653)
DNA (1089bp) protein (363aa)
Spermidine/putrescine-binding periplasmic protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DLZ5_9FIRM
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:CCX81270.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Spermidine/putrescine-binding periplasmic protein
L1_007_000M1_scaffold_67_40
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(48686..49492)
DNA (807bp) protein (269aa)
ABC-type spermidine/putrescine transport system permease component II n=2 Tax=root RepID=R5DX98_9FIRM
ABC-type spermidine/putrescine transport system, permease component II
ABC-type spermidine/putrescine transport system permease component II {ECO:0000313|EMBL:CCX81272.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_67_41
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49492..50283)
DNA (792bp) protein (264aa)
ABC-type spermidine/putrescine transport system permease component I n=2 Tax=root RepID=R5DM28_9FIRM
ABC-type spermidine/putrescine transport system permease component I {ECO:0000313|EMBL:CCX81273.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
ABC-type spermidine/putrescine transport system, permease component I
L1_007_000M1_scaffold_67_42
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50287..51711)
DNA (1425bp) protein (475aa)
ABC-type spermidine/putrescine transport systems, ATPase components (EC:3.6.3.31)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00035095}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00035095, ECO:0000313|EMBL:CBL16182.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
ABC-type spermidine/putrescine transport systems, ATPase components n=3 Tax=root RepID=D4L987_9FIRM
L1_007_000M1_scaffold_67_43
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52269..55439
DNA (3171bp) protein (1057aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Glycosidases n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DXA3_9FIRM
Glycosidases
L1_007_000M1_scaffold_67_44
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

55614..56183
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L984_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL16179.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_67_45
unknown

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56177..56311
DNA (135bp) protein (45aa)

This feature has no annotations

L1_007_000M1_scaffold_67_46
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56395..57411)
DNA (1017bp) protein (339aa)
Actin-like ATPase involved in cell morphogenesis n=2 Tax=Ruminococcus RepID=D4L983_9FIRM
Actin-like ATPase involved in cell morphogenesis
Actin-like ATPase involved in cell morphogenesis {ECO:0000313|EMBL:CBL16178.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_67_47
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57428..58090)
DNA (663bp) protein (221aa)
Predicted amidophosphoribosyltransferases n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DXA9_9FIRM
Predicted amidophosphoribosyltransferases {ECO:0000313|EMBL:CCX81282.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Predicted amidophosphoribosyltransferases
L1_007_000M1_scaffold_67_48
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58074..60287)
DNA (2214bp) protein (738aa)
helicase, putative, RecD/TraA family (EC:3.1.11.5)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Helicase, putative, RecD/TraA family n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L981_9FIRM
L1_007_000M1_scaffold_67_49
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(60294..61016)
DNA (723bp) protein (241aa)
Predicted glutamine amidotransferase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DM08_9FIRM
Predicted glutamine amidotransferase {ECO:0000313|EMBL:CCX81285.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Predicted glutamine amidotransferase
L1_007_000M1_scaffold_67_50
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61019..62344)
DNA (1326bp) protein (442aa)
UDP-N-acetylmuramyl tripeptide synthase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L979_9FIRM
UDP-N-acetylmuramyl tripeptide synthase
UDP-N-acetylmuramyl tripeptide synthase {ECO:0000313|EMBL:CBL16174.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_67_51
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(62581..62775)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DM13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81290.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_67_52
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63032..63631
DNA (600bp) protein (200aa)
Acetyltransferase (isoleucine patch superfamily) (EC:2.3.1.79 2.3.1.18)
Acetyltransferase (Isoleucine patch superfamily) {ECO:0000313|EMBL:CBL16173.1}; EC=2.3.1.18 {ECO:0000313|EMBL:CBL16173.1};; EC=2.3.1.79 {ECO:0000313|EMBL:CBL16173.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Acetyltransferase (Isoleucine patch superfamily) n=2 Tax=Ruminococcus RepID=D4L978_9FIRM
L1_007_000M1_scaffold_67_53
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63649..64899
DNA (1251bp) protein (417aa)
GTPase HflX n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DR57_9FIRM
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
GTP-binding protein HflX
L1_007_000M1_scaffold_67_54
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

64968..65573
DNA (606bp) protein (202aa)
Membrane-associated phospholipid phosphatase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L976_9FIRM
Membrane-associated phospholipid phosphatase
Membrane-associated phospholipid phosphatase {ECO:0000313|EMBL:CBL16171.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_67_55
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

65578..65799
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L975_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL16170.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_67_56
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

65851..66525
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L974_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL16169.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_67_57
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

66863..68245
DNA (1383bp) protein (461aa)
Uncharacterized FAD-dependent dehydrogenases n=2 Tax=Ruminococcus RepID=D4L973_9FIRM
Uncharacterized FAD-dependent dehydrogenases
Uncharacterized FAD-dependent dehydrogenases {ECO:0000313|EMBL:CBL16168.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_67_58
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

68852..70606
DNA (1755bp) protein (585aa)
DNA polymerase III subunit gamma and tau n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DR68_9FIRM
DNA polymerase III subunit gamma and tau {ECO:0000313|EMBL:CCX81304.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_67_59
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

70626..70976
DNA (351bp) protein (117aa)
Nucleoid-associated protein RBR_20330 n=2 Tax=Ruminococcus RepID=D4L971_9FIRM
conserved hypothetical protein TIGR00103
Nucleoid-associated protein RBR_20330 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_67_60
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

70979..71581
DNA (603bp) protein (201aa)
Recombination protein RecR n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DXE0_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
recombination protein RecR
Displaying items 31-60 of 128 in total

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