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L1_007_000M1_scaffold_67

Search features with annotation key words

Displaying items 1-30 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_67_1
unknown

Not on your lists

894..1070
DNA (177bp) protein (59aa)

This feature has no annotations

L1_007_000M1_scaffold_67_2
unknown

Not on your lists

1086..1268
DNA (183bp) protein (61aa)

This feature has no annotations

L1_007_000M1_scaffold_67_3
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1359..2609
DNA (1251bp) protein (417aa)
Resolvase domain n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UKL7_RUMA7
Resolvase domain
Resolvase domain {ECO:0000313|EMBL:ADU24213.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L1_007_000M1_scaffold_67_4

Not on your lists

2991..3647
DNA (657bp) protein (219aa)
Prophage antirepressor (Fragment) n=1 Tax=human gut metagenome RepID=K1VC58_9ZZZZ
Prophage antirepressor {ECO:0000313|EMBL:EKC81571.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
MCYN0659; hypothetical protein
L1_007_000M1_scaffold_67_5
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3722..4660)
DNA (939bp) protein (313aa)
Phage integrase, SAM-like domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MDJ6_9FIRM
Phage integrase, SAM-like domain protein {ECO:0000313|EMBL:ERJ97383.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Site-specific recombinase XerD
L1_007_000M1_scaffold_67_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5135..6514
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RUF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53244.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Hypothetical protein
L1_007_000M1_scaffold_67_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6493..7209)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J831_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53243.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L1_007_000M1_scaffold_67_8
Streptococcus agalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7523..9202
DNA (1680bp) protein (560aa)
AAA domain protein n=2 Tax=root RepID=R6VK16_9CLOT
AAA-domain protein {ECO:0000313|EMBL:AIK22035.1}; TaxID=1311 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus agalactiae.;"
hypothetical protein
L1_007_000M1_scaffold_67_9
Streptococcus agalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9199..10701
DNA (1503bp) protein (501aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1311 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus agalactiae.;"
UvrD-like helicase n=1 Tax=Clostridium sp. MSTE9 RepID=J0WUK5_9CLOT
hypothetical protein
L1_007_000M1_scaffold_67_10
unknown

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10798..11640
DNA (843bp) protein (281aa)

This feature has no annotations

L1_007_000M1_scaffold_67_11
unknown

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11660..12688
DNA (1029bp) protein (343aa)

This feature has no annotations

L1_007_000M1_scaffold_67_12
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13230..15194
DNA (1965bp) protein (655aa)
Putative uncharacterized protein n=1 Tax=Clostridium novyi (strain NT) RepID=A0Q1I2_CLONN
Uncharacterized protein {ECO:0000313|EMBL:KGN02119.1}; TaxID=1444290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4570.;"
hypothetical protein
L1_007_000M1_scaffold_67_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15240..15707)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C3772E
Phage minor capsid protein 2 {ECO:0000313|EMBL:ERJ94756.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Phage minor capsid protein 2.
L1_007_000M1_scaffold_67_14
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16277..20275
DNA (3999bp) protein (1333aa)
CRISPR-associated endonuclease Cas9 {ECO:0000256|HAMAP-Rule:MF_01480}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01480};; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
CRISPR-associated endonuclease Csn1 family n=1 Tax=Clostridium sp. CAG:964 RepID=R6U7U5_9CLOT
CRISPR-associated endonuclease, Csn1 family
L1_007_000M1_scaffold_67_15
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21139..22806
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DU92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83728.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_67_16
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22803..24110
DNA (1308bp) protein (436aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L9H9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL16274.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_67_17
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24088..24726
DNA (639bp) protein (213aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E6G1_9FIRM
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:CCX83731.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L1_007_000M1_scaffold_67_18
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24912..25313
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E6G7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83736.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_67_19
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25507..25893
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83738.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_67_20
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25910..26494
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L9H6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL16271.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_67_21
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26508..28052
DNA (1545bp) protein (515aa)
Dockerin type I repeat n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E6H1_9FIRM
Dockerin type I repeat {ECO:0000313|EMBL:CCX83741.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Dockerin type I repeat.
L1_007_000M1_scaffold_67_22
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28065..29198
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83743.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_67_23
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29246..29632
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DU33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83745.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_67_24
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29793..30167
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E4P6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83747.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_67_25
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30164..31990
DNA (1827bp) protein (609aa)
ATP-dependent DNA helicase, RecQ-like (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ-like n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUB3_9FIRM
ATP-dependent DNA helicase RecQ-like {ECO:0000313|EMBL:CCX83748.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_67_26
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32120..33232
DNA (1113bp) protein (371aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L9H1_9FIRM
Protein of unknown function (DUF2974).
Uncharacterized protein {ECO:0000313|EMBL:CBL16266.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_67_27
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33429..34187)
DNA (759bp) protein (253aa)
exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E6I2_9FIRM
Exodeoxyribonuclease III {ECO:0000313|EMBL:CCX83751.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_67_28
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34252..34410)
DNA (159bp) protein (53aa)
Rubredoxin n=2 Tax=Ruminococcus RepID=D4L9G9_9FIRM
Rubredoxin
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071, ECO:0000313|EMBL:CBL16264.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_67_29
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34508..35047)
DNA (540bp) protein (180aa)
Rubrerythrin n=2 Tax=Ruminococcus RepID=D4L9G8_9FIRM
Rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:CCX83764.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_67_30
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35073..35465)
DNA (393bp) protein (131aa)
Fe2+/Zn2+ uptake regulation proteins n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E6J8_9FIRM
Fe2+/Zn2+ uptake regulation proteins {ECO:0000313|EMBL:CCX83766.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Fe2+/Zn2+ uptake regulation proteins
Displaying items 1-30 of 128 in total

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