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L1_007_000M1_scaffold_69

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Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_69_1
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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332..652
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GQH4_SELRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL83011.1}; TaxID=927704 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 /; TAM6421).;"
L1_007_000M1_scaffold_69_2
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(769..3534)
DNA (2766bp) protein (922aa)
Efflux ABC transporter permease protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGM5_9ACTN
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDA35719.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter
L1_007_000M1_scaffold_69_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3540..4241)
DNA (702bp) protein (234aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E943_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74565.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter
L1_007_000M1_scaffold_69_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4513..4872
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E942_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39787.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L1_007_000M1_scaffold_69_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4960..5151
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZMZ1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39787.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L1_007_000M1_scaffold_69_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5323..6237
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E941_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39786.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L1_007_000M1_scaffold_69_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6393..7418)
DNA (1026bp) protein (342aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
aspartate semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E940_9ACTN
L1_007_000M1_scaffold_69_8
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7593..8981)
DNA (1389bp) protein (463aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Aspartokinase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZA56_9ACTN
aspartate kinase
L1_007_000M1_scaffold_69_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9085..10602
DNA (1518bp) protein (506aa)
Threonine synthase {ECO:0000313|EMBL:EBA39783.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EBA39783.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Threonine synthase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E938_9ACTN
threonine synthase
L1_007_000M1_scaffold_69_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10804..11685
DNA (882bp) protein (294aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Homoserine kinase n=2 Tax=Collinsella RepID=A4E937_9ACTN
homoserine kinase
L1_007_000M1_scaffold_69_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11922..12512)
DNA (591bp) protein (197aa)
Probable GTP-binding protein EngB n=2 Tax=Collinsella RepID=A4E934_9ACTN
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ribosome biogenesis GTP-binding protein YsxC
L1_007_000M1_scaffold_69_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12552..13292)
DNA (741bp) protein (247aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00131176}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00064821};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00064819}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00131282}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
methylthioadenosine nucleosidase (EC:3.2.2.16)
MTA/SAH nucleosidase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNX4_9ACTN
L1_007_000M1_scaffold_69_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13415..14233)
DNA (819bp) protein (273aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E931_9ACTN
L1_007_000M1_scaffold_69_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14408..15262)
DNA (855bp) protein (285aa)
EDD domain protein DegV family n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8Q8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74576.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
degV family protein
L1_007_000M1_scaffold_69_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15540..16982)
DNA (1443bp) protein (481aa)
beta-fructofuranosidase (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E929_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74367.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L1_007_000M1_scaffold_69_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17084..18535)
DNA (1452bp) protein (484aa)
PTS system glucose-like IIB component n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZB55_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74368.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
PTS system, glucose subfamily, IIA component
L1_007_000M1_scaffold_69_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18581..19963)
DNA (1383bp) protein (461aa)
Glycosyl hydrolase family 32 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E927_9ACTN
Glycosyl hydrolase family 32 {ECO:0000313|EMBL:EBA39772.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Beta-fructosidases (levanase/invertase)
L1_007_000M1_scaffold_69_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20147..21157)
DNA (1011bp) protein (337aa)
Transcriptional regulator, LacI family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E926_9ACTN
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EBA39771.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
transcriptional regulator, LacI family
L1_007_000M1_scaffold_69_19
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21458..21709)
DNA (252bp) protein (84aa)
Glycine radical domain protein n=2 Tax=Collinsella RepID=A4E925_9ACTN
Glycine radical domain protein {ECO:0000313|EMBL:CDA36432.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
formate C-acetyltransferase glycine radical
L1_007_000M1_scaffold_69_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21795..23846)
DNA (2052bp) protein (684aa)
formate acetyltransferase (EC:2.3.1.54)
Formate C-acetyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E924_9ACTN
Formate acetyltransferase {ECO:0000313|EMBL:KGI74372.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L1_007_000M1_scaffold_69_21
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24396..24845
DNA (450bp) protein (150aa)
Transcriptional regulator MarR family n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9P3_9ACTN
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDA36428.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L1_007_000M1_scaffold_69_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24842..27208
DNA (2367bp) protein (789aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A5N3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74374.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter
L1_007_000M1_scaffold_69_23
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27208..29064
DNA (1857bp) protein (619aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPW3_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA36426.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter
L1_007_000M1_scaffold_69_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29645..30676
DNA (1032bp) protein (344aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E915_9ACTN
L1_007_000M1_scaffold_69_25
unknown

Not on your lists

31444..31635
DNA (192bp) protein (64aa)

This feature has no annotations

L1_007_000M1_scaffold_69_26
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31671..33080)
DNA (1410bp) protein (470aa)
Amino acid permease-associated region n=1 Tax=Collinsella sp. CAG:289 RepID=R7D6M7_9ACTN
Amino acid permease-associated region {ECO:0000313|EMBL:CDD85167.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
PotE; amino acid transporter
L1_007_000M1_scaffold_69_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33682..34887)
DNA (1206bp) protein (402aa)
Putative agmatine deiminase {ECO:0000256|HAMAP-Rule:MF_01841}; EC=3.5.3.12 {ECO:0000256|HAMAP-Rule:MF_01841};; Agmatine iminohydrolase {ECO:0000256|HAMAP-Rule:MF_01841}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Putative agmatine deiminase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZEV8_9ACTN
agmatine deiminase
L1_007_000M1_scaffold_69_28
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(35173..36612)
DNA (1440bp) protein (480aa)
Amino acid permease n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z881_9ACTN
Amino acid permease {ECO:0000313|EMBL:CDA35065.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
amino acid transporter protein
L1_007_000M1_scaffold_69_29
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(36746..37900)
DNA (1155bp) protein (385aa)
Ornithine carbamoyltransferase {ECO:0000256|SAAS:SAAS00106174}; EC=2.1.3.3 {ECO:0000256|SAAS:SAAS00106174};; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Collinsella sp. CAG:289 RepID=R7D4K7_9ACTN
L1_007_000M1_scaffold_69_30
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

38150..39115
DNA (966bp) protein (322aa)
DNA-binding HTH domain-containing protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D5V4_9ACTN
DNA-binding HTH domain-containing protein {ECO:0000313|EMBL:CDD85168.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
CsgD; DNA-binding HTH domain-containing protein
Displaying items 1-30 of 119 in total

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