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L1_007_000M1_scaffold_76

Search features with annotation key words

Displaying items 31-60 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_76_31
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35269..36258)
DNA (990bp) protein (330aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A7AHD2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85749.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_76_32
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36349..37377)
DNA (1029bp) protein (343aa)
Heptosyltransferase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WJ08_9PORP
Heptosyltransferase {ECO:0000313|EMBL:CDD11093.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycosyltransferase family protein
L1_007_000M1_scaffold_76_33
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37377..37982)
DNA (606bp) protein (202aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AHD0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11091.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_76_34
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38035..38718)
DNA (684bp) protein (228aa)
DNA-binding response regulator MtrA n=3 Tax=Parabacteroides RepID=A7AHC9_9PORP
DNA-binding response regulator MtrA {ECO:0000313|EMBL:CDD11089.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
two-component system response regulator
L1_007_000M1_scaffold_76_35
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38725..40149)
DNA (1425bp) protein (475aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Parabacteroides merdae RepID=A7AHC8_9PORP
histidine kinase
L1_007_000M1_scaffold_76_36
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40414..44040)
DNA (3627bp) protein (1209aa)
F5/8 type C domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WNW8_9PORP
F5/8 type C domain protein {ECO:0000313|EMBL:CDD11085.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
F5/8 type C domain-containing protein
L1_007_000M1_scaffold_76_37
unknown

Not on your lists

44412..44531
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6C1P0_9PORP
L1_007_000M1_scaffold_76_38
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44528..44800
DNA (273bp) protein (91aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6A5C1_9PORP
Putative toxin-antitoxin system antitoxin component {ECO:0000313|EMBL:CDD11083.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_76_39
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44896..45753
DNA (858bp) protein (286aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AHC3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11081.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_76_40
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45772..48264
DNA (2493bp) protein (831aa)
Outer membrane insertion signal domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WVZ4_9PORP
Outer membrane insertion signal domain protein {ECO:0000313|EMBL:CDD11079.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_76_41
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

49057..49911
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X4B7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11071.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_76_42
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

49947..51059
DNA (1113bp) protein (371aa)
Erythronate-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01825, ECO:0000256|SAAS:SAAS00019216}; EC=1.1.1.290 {ECO:0000256|HAMAP-Rule:MF_01825, ECO:0000256|SAAS:SAAS00019244};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Erythronate-4-phosphate dehydrogenase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WNV5_9PORP
erythronate-4-phosphate dehydrogenase
L1_007_000M1_scaffold_76_43
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

51078..52277
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YGV6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12827.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
transmembrane transport protein
L1_007_000M1_scaffold_76_44
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(52288..53139)
DNA (852bp) protein (284aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZMU1_9PORP
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDD11062.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
transcriptional regulator
L1_007_000M1_scaffold_76_45
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

53296..54486
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WNU7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11060.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_76_46
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

54498..57167
DNA (2670bp) protein (890aa)
TonB-dependent receptor n=2 Tax=Parabacteroides merdae RepID=A7AHB5_9PORP
TonB-dependent receptor {ECO:0000313|EMBL:EDN85732.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
vitamin B12 receptor
L1_007_000M1_scaffold_76_47
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(57177..57749)
DNA (573bp) protein (191aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Phosphoribosylglycinamide formyltransferase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WVX7_9PORP
phosphoribosylglycinamide formyltransferase
L1_007_000M1_scaffold_76_48
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

57904..58140
DNA (237bp) protein (79aa)
Acyl carrier protein n=14 Tax=Bacteroidales RepID=A7AHB2_9PORP
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
acpP; acyl carrier protein
L1_007_000M1_scaffold_76_49
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

58162..59427
DNA (1266bp) protein (422aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=3 Tax=Parabacteroides RepID=A7AHB1_9PORP
3-oxoacyl-ACP synthase
L1_007_000M1_scaffold_76_50
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

59471..60334
DNA (864bp) protein (288aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Ribonuclease 3 n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y2I8_9PORP
ribonuclease III
L1_007_000M1_scaffold_76_51
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(60331..61344)
DNA (1014bp) protein (338aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=4 Tax=Parabacteroides RepID=A7AHA9_9PORP
Phosphofructokinase {ECO:0000313|EMBL:EDN85726.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L1_007_000M1_scaffold_76_52
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

61425..62939
DNA (1515bp) protein (505aa)
GH3 auxin-responsive promoter n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WTI0_9PORP
GH3 auxin-responsive promoter {ECO:0000313|EMBL:CDD12665.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
auxin-regulated protein
L1_007_000M1_scaffold_76_53
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(62976..63779)
DNA (804bp) protein (268aa)
PAP2 family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y2J6_9PORP
PAP2 family protein {ECO:0000313|EMBL:CDD12667.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_76_54
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(63909..65006)
DNA (1098bp) protein (366aa)
2-aminoethylphosphonate--pyruvate transaminase {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569}; EC=2.6.1.37 {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569};; 2-aminoethylphosphonate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01376}; AEP transaminase {ECO:0000256|HAMAP-Rule:MF_01376}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
2-aminoethylphosphonate--pyruvate transaminase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WTI6_9PORP
2-aminoethylphosphonate--pyruvate transaminase
L1_007_000M1_scaffold_76_55
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(65024..65812)
DNA (789bp) protein (263aa)
Phosphonoacetaldehyde hydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; Short=Phosphonatase {ECO:0000256|HAMAP-Rule:MF_01375};; EC=3.11.1.1 {ECO:0000256|HAMAP-Rule:MF_01375};; Phosphonoacetaldehyde phosphonohydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Phosphonoacetaldehyde hydrolase n=3 Tax=Parabacteroides RepID=A7AHA5_9PORP
phosphonoacetaldehyde hydrolase
L1_007_000M1_scaffold_76_56
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(65849..67195)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X0J0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12674.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_76_57
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

67393..68271
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X8L1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12676.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_76_58
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(68306..70561)
DNA (2256bp) protein (752aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AHA2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12678.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
phosphate/sulfate permease
L1_007_000M1_scaffold_76_59
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

70758..71318
DNA (561bp) protein (187aa)
RNA polymerase sigma-70 factor n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WTJ6_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CDD12680.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ECF-type sigma factor
L1_007_000M1_scaffold_76_60
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

71556..72539
DNA (984bp) protein (328aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Parabacteroides RepID=A7AHA0_9PORP
Sigma factor regulatory protein FecR/PupR family {ECO:0000313|EMBL:CDD12682.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
anti-sigma factor
Displaying items 31-60 of 98 in total

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