ggKbase home page

L1_007_000M1_scaffold_76

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_76_1
unknown

Not on your lists

2..154
DNA (153bp) protein (51aa)

This feature has no annotations

L1_007_000M1_scaffold_76_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

224..1141
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X7S2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12391.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_76_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1291..2580)
DNA (1290bp) protein (430aa)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WMI9_9PORP
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:CDD12393.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
O-acetylhomoserine (thiol)-lyase
L1_007_000M1_scaffold_76_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2756..3226
DNA (471bp) protein (157aa)
Transcriptional regulator, AsnC family n=3 Tax=Parabacteroides RepID=A7AHG7_9PORP
Transcriptional regulator AsnC family {ECO:0000313|EMBL:CDD12395.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
transcriptional regulator
L1_007_000M1_scaffold_76_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3255..4271)
DNA (1017bp) protein (339aa)
Oxidoreductase NAD-binding domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y1P0_9PORP
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:CDD12397.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
dehydrogenase
L1_007_000M1_scaffold_76_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4373..5545)
DNA (1173bp) protein (391aa)
DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZR9_9PORP
DegT/DnrJ/EryC1/StrS aminotransferase family protein {ECO:0000313|EMBL:CDD12399.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
aminotransferase
L1_007_000M1_scaffold_76_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(5605..7671)
DNA (2067bp) protein (689aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=2 Tax=Parabacteroides merdae RepID=A7AHG4_9PORP
L1_007_000M1_scaffold_76_8
Bacteroides helcogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7758..9419)
DNA (1662bp) protein (554aa)
Putative lipoprotein n=1 Tax=Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108) RepID=E6SSD6_BACT6
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ADV45187.1}; Flags: Precursor;; TaxID=693979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P; 36-108).;"
L1_007_000M1_scaffold_76_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9426..10175)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Bacteroides barnesiae RepID=UPI00037C10AA
Uncharacterized protein {ECO:0000313|EMBL:KDS41434.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L1_007_000M1_scaffold_76_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10172..12310)
DNA (2139bp) protein (713aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z8R0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12004.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L1_007_000M1_scaffold_76_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12315..13595)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R5JSC9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS41432.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L1_007_000M1_scaffold_76_12
unknown

Not on your lists

comp(13592..14350)
DNA (759bp) protein (253aa)

This feature has no annotations

L1_007_000M1_scaffold_76_13
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14352..17006)
DNA (2655bp) protein (885aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DJX7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB46624.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
hypothetical protein
L1_007_000M1_scaffold_76_14
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17254..18108
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZI93_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11186.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
transcriptional regulator
L1_007_000M1_scaffold_76_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18231..18878)
DNA (648bp) protein (216aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6A5E6_9PORP
Putative DNA-binding protein {ECO:0000313|EMBL:CDD12571.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_76_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19334..20872)
DNA (1539bp) protein (513aa)
Mg chelatase-like protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WN15_9PORP
Mg chelatase-like protein {ECO:0000313|EMBL:CDD12568.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
magnesium chelatase subunit ChlI
L1_007_000M1_scaffold_76_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20965..22092)
DNA (1128bp) protein (376aa)
Antioxidant AhpC/TSA family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WT86_9PORP
Antioxidant AhpC/TSA family {ECO:0000313|EMBL:CDD12565.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_76_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22225..23832)
DNA (1608bp) protein (536aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZKH4_9PORP
pckA; putative phosphoenolpyruvate carboxykinase
L1_007_000M1_scaffold_76_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24243..24482)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y9E4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15027.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_76_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24466..24822)
DNA (357bp) protein (119aa)
Nucleotidyltransferase domain protein n=5 Tax=Parabacteroides RepID=A7AHE5_9PORP
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:CDD15026.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_76_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24871..25887)
DNA (1017bp) protein (339aa)
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein n=3 Tax=Parabacteroides merdae RepID=A7AHE4_9PORP
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein {ECO:0000313|EMBL:EDN85761.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
2-oxoglutarate ferredoxin oxidoreductase subunit beta
L1_007_000M1_scaffold_76_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25891..27747)
DNA (1857bp) protein (619aa)
2-oxoacid:acceptor oxidoreductase alpha subunit n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WP07_9PORP
2-oxoacid:acceptor oxidoreductase alpha subunit {ECO:0000313|EMBL:CDD11125.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
oxidoreductase
L1_007_000M1_scaffold_76_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27838..29037)
DNA (1200bp) protein (400aa)
Putative alanine dehydrogenase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WW24_9PORP
Putative alanine dehydrogenase {ECO:0000313|EMBL:CDD11124.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
alanine dehydrogenase
L1_007_000M1_scaffold_76_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29106..29627)
DNA (522bp) protein (174aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Shikimate kinase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WJ32_9PORP
shikimate kinase
L1_007_000M1_scaffold_76_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29907..30542
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XY13_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11122.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ribonuclease H-like protein
L1_007_000M1_scaffold_76_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30544..31833)
DNA (1290bp) protein (430aa)
Nucleotide sugar dehydrogenase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X4F4_9PORP
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:CDD11121.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
UDP-N-acetyl-D-mannosaminuronate dehydrogenase
L1_007_000M1_scaffold_76_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31855..32553)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WP02_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11120.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative capsular polysaccharide biosynthesis protein
L1_007_000M1_scaffold_76_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32809..33579
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WJ30_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11118.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_76_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33607..34374
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X4F1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11116.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
family 2 glycosyl transferase
L1_007_000M1_scaffold_76_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34365..35285)
DNA (921bp) protein (307aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AHD3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85750.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Lipopolysaccharide kinase (Kdo/WaaP) family.
Displaying items 1-30 of 98 in total

View Taxonomy