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L1_007_000M1_scaffold_86

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_86_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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905..4318
DNA (3414bp) protein (1138aa)
beta-galactosidase (EC:3.2.1.23)
Glycosyl hydrolase family 2 sugar binding domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WY34_9PORP
Glycosyl hydrolase family 2 sugar binding domain protein {ECO:0000313|EMBL:CDD14235.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_86_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4452..5321
DNA (870bp) protein (290aa)
Transcriptional regulator AraC family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XD14_9PORP
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDD14236.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_86_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5458..6150
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y739_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14237.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
demethylmenaquinone methyltransferase
L1_007_000M1_scaffold_86_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6180..7349
DNA (1170bp) protein (390aa)
galactonate dehydratase (EC:4.2.1.6)
Mandelate racemase/muconate lactonizing enzyme N-terminal domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSC6_9PORP
Mandelate racemase/muconate lactonizing enzyme N-terminal domain protein {ECO:0000313|EMBL:CDD14238.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_86_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7355..8146
DNA (792bp) protein (264aa)
short-chain dehydrogenase/reductase (EC:1.-.-.-)
Oxidoreductase short chain dehydrogenase/reductase family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X519_9PORP
Oxidoreductase short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:CDD14239.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_86_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8159..9712
DNA (1554bp) protein (518aa)
Transporter SSS family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WY38_9PORP
Transporter SSS family {ECO:0000313|EMBL:CDD14240.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
SSS sodium solute transporter superfamily
L1_007_000M1_scaffold_86_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9744..12743
DNA (3000bp) protein (1000aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6B2V0_9PORP
beta-galactosidase
L1_007_000M1_scaffold_86_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12919..14088)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6C256_9PORP
Peptidase C1-like family {ECO:0000313|EMBL:CDD14243.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
aminopeptidase
L1_007_000M1_scaffold_86_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14173..15783)
DNA (1611bp) protein (537aa)
Peptidase, C69 family n=3 Tax=Parabacteroides RepID=A7AA72_9PORP
Peptidase, C69 family {ECO:0000313|EMBL:EDN88529.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
secreted peptidase
L1_007_000M1_scaffold_86_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15911..17485
DNA (1575bp) protein (525aa)
Glycosyl hydrolase family 20, catalytic domain protein n=2 Tax=Parabacteroides merdae RepID=A7AA71_9PORP
Glycosyl hydrolase family 20, catalytic domain protein {ECO:0000313|EMBL:EDN88528.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
nahA; putative exported beta-hexosaminidase
L1_007_000M1_scaffold_86_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17516..17803)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AA70_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88527.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L1_007_000M1_scaffold_86_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18057..18395
DNA (339bp) protein (113aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AA68_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14246.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_86_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18440..20206)
DNA (1767bp) protein (589aa)
DEAD/DEAH box helicase n=4 Tax=Parabacteroides RepID=A7AA67_9PORP
DEAD/DEAH box helicase {ECO:0000313|EMBL:CDD14247.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ATP-dependent RNA helicase
L1_007_000M1_scaffold_86_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20332..21396)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSD4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14248.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_86_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21475..22404)
DNA (930bp) protein (310aa)
Kinase PfkB family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X530_9PORP
Kinase PfkB family {ECO:0000313|EMBL:CDD14249.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
fructokinase
L1_007_000M1_scaffold_86_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22410..23027)
DNA (618bp) protein (206aa)
Sugar isomerase, KpsF/GutQ family n=4 Tax=Parabacteroides RepID=A7AA63_9PORP
Sugar isomerase, KpsF/GutQ family {ECO:0000313|EMBL:EDN88519.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
sugar isomerase
L1_007_000M1_scaffold_86_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23056..24378
DNA (1323bp) protein (441aa)
Peptidase M16 inactive domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XD27_9PORP
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:CDD14251.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
zinc protease YmxG
L1_007_000M1_scaffold_86_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24386..25786)
DNA (1401bp) protein (467aa)
Amino acid carrier protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AA61_9PORP
Amino acid carrier protein {ECO:0000313|EMBL:EDN88518.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
amino acid carrier protein
L1_007_000M1_scaffold_86_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25932..26438
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WYE7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14345.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_86_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26858..28219
DNA (1362bp) protein (454aa)
Outer membrane efflux protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XDA7_9PORP
Outer membrane efflux protein {ECO:0000313|EMBL:CDD14346.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative outer membrane protein
L1_007_000M1_scaffold_86_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28231..29493
DNA (1263bp) protein (421aa)
Efflux transporter RND family MFP subunit n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y7H1_9PORP
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDD14347.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ABC transporter permease
L1_007_000M1_scaffold_86_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29493..31898
DNA (2406bp) protein (802aa)
Efflux ABC transporter permease protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSM0_9PORP
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDD14348.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative ABC transporter permease
L1_007_000M1_scaffold_86_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31915..32577
DNA (663bp) protein (221aa)
ABC transporter, ATP-binding protein n=2 Tax=Parabacteroides merdae RepID=A7AA56_9PORP
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN88513.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
putative ABC transport system ATP-binding protein
L1_007_000M1_scaffold_86_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32606..35029
DNA (2424bp) protein (808aa)
Efflux ABC transporter permease protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WYF4_9PORP
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDD14350.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative FtsX-related transmembrane transport protein
L1_007_000M1_scaffold_86_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35173..35580)
DNA (408bp) protein (136aa)
Putative phenylacetic acid degradation protein PaaD n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XDB5_9PORP
Putative phenylacetic acid degradation protein PaaD {ECO:0000313|EMBL:CDD14351.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
phenylacetic acid degradation protein
L1_007_000M1_scaffold_86_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35672..37150)
DNA (1479bp) protein (493aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y7H7_9PORP
L1_007_000M1_scaffold_86_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37254..39062
DNA (1809bp) protein (603aa)
Alpha-1 3-galactosidase B n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSM6_9PORP
Alpha-1 3-galactosidase B {ECO:0000313|EMBL:CDD14353.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ATP/GTP-binding site
L1_007_000M1_scaffold_86_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39164..41005)
DNA (1842bp) protein (614aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X5E2_9PORP
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
L1_007_000M1_scaffold_86_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41124..41630)
DNA (507bp) protein (169aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WYG1_9PORP
phosphoribosylaminoimidazole carboxylase catalytic subunit PurE
L1_007_000M1_scaffold_86_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41627..42007)
DNA (381bp) protein (127aa)
Glycine cleavage system H protein n=4 Tax=Parabacteroides RepID=A7AA48_9PORP
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycine cleavage system protein H
Displaying items 1-30 of 86 in total

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