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L1_007_000M1_scaffold_86

Search features with annotation key words

Displaying items 31-60 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_86_31
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(42024..42644)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y7I4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14357.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_86_32
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42657..44183)
DNA (1527bp) protein (509aa)
RNA polymerase sigma-54 factor n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSN2_9PORP
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:CDD14358.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
RNA polymerase sigma-54
L1_007_000M1_scaffold_86_33
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44324..46486
DNA (2163bp) protein (721aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
PAS domain S-box protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X5E7_9PORP
two-component hybrid sensor kinase/response regulator
L1_007_000M1_scaffold_86_34
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(46758..48425)
DNA (1668bp) protein (556aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AC10_9PORP
Phosphoribulokinase/uridine kinase family protein {ECO:0000313|EMBL:CDD14360.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
uridine kinase
L1_007_000M1_scaffold_86_35
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

48508..50196
DNA (1689bp) protein (563aa)
Na/Pi-cotransporter II-like protein n=4 Tax=Parabacteroides RepID=A7AA41_9PORP
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:EDN88498.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Na+-dependent phosphate transporter
L1_007_000M1_scaffold_86_36
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(50343..51830)
DNA (1488bp) protein (496aa)
SAF domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y7I8_9PORP
SAF domain protein {ECO:0000313|EMBL:CDD14362.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
altronate hydrolase
L1_007_000M1_scaffold_86_37
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(51830..53269)
DNA (1440bp) protein (480aa)
altronate oxidoreductase (EC:1.1.1.58)
Mannitol dehydrogenase domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSN6_9PORP
Mannitol dehydrogenase domain protein {ECO:0000313|EMBL:CDD14363.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_86_38
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(53316..53423)
DNA (108bp) protein (36aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AA38_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14364.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_86_39
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

53493..54368
DNA (876bp) protein (292aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6C225_9PORP
SMP-30/Gluconolaconase/LRE-like region {ECO:0000313|EMBL:EDN88494.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
regucalcin-like protein
L1_007_000M1_scaffold_86_40
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

54452..56632
DNA (2181bp) protein (727aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Ribonuclease R n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XDD5_9PORP
ribonuclease R
L1_007_000M1_scaffold_86_41
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(56712..56927)
DNA (216bp) protein (72aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AA35_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14367.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_86_42
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(56929..57348)
DNA (420bp) protein (140aa)
Hydrolase, P-loop family n=4 Tax=Parabacteroides RepID=A7AA34_9PORP
YjeE family ATPase {ECO:0000313|EMBL:EKN13215.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
ATPase/GTPase
L1_007_000M1_scaffold_86_43
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(57488..59038)
DNA (1551bp) protein (517aa)
PglZ domain protein n=3 Tax=Parabacteroides RepID=A7AA32_9PORP
PglZ domain protein {ECO:0000313|EMBL:CDD14369.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
two-component system response regulator
L1_007_000M1_scaffold_86_44
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

59197..61698
DNA (2502bp) protein (834aa)
Glycosyl hydrolase family 2 sugar binding domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WYH9_9PORP
Glycosyl hydrolase family 2 sugar binding domain protein {ECO:0000313|EMBL:CDD14370.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
beta-glycosidase
L1_007_000M1_scaffold_86_45
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

62181..62612
DNA (432bp) protein (144aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XDE2_9PORP
L1_007_000M1_scaffold_86_46
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

62652..64418
DNA (1767bp) protein (589aa)
Tetratricopeptide repeat protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y7J8_9PORP
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDD14372.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_86_47
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

64411..65250
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSP4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14373.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_86_48
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

65252..66583
DNA (1332bp) protein (444aa)
Peptidase M23 family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X5G2_9PORP
Peptidase M23 family {ECO:0000313|EMBL:CDD14374.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
M24/M37 family peptidase
L1_007_000M1_scaffold_86_49
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(66649..67938)
DNA (1290bp) protein (430aa)
Polysaccharide biosynthesis protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WYI6_9PORP
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDD14375.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
O-antigen and teichoic acid export membrane protein
L1_007_000M1_scaffold_86_50
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(67993..69048)
DNA (1056bp) protein (352aa)
Peptidase dimerization domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XDF1_9PORP
Peptidase dimerization domain protein {ECO:0000313|EMBL:CDD14376.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
acetylornithine deacetylase
L1_007_000M1_scaffold_86_51
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(69058..69984)
DNA (927bp) protein (309aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Riboflavin biosynthesis protein RibF n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y7K3_9PORP
riboflavin biosynthesis protein RibF
L1_007_000M1_scaffold_86_52
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

70112..71503
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZPH4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13205.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L1_007_000M1_scaffold_86_53
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

71457..73235
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X5G7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14379.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_86_54
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

73263..73805
DNA (543bp) protein (181aa)
RNA polymerase sigma-70 factor n=3 Tax=Parabacteroides RepID=A7AA21_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDN88478.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ECF subfamily RNA polymerase sigma-24 subunit
L1_007_000M1_scaffold_86_55
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

74454..75434
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6ABZ5_9PORP
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EDN88477.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
anti-FecI sigma factor FecR
L1_007_000M1_scaffold_86_56
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

75593..79072
DNA (3480bp) protein (1160aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWR6_9PORP
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDD13785.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
frrG; putative outer membrane protein
L1_007_000M1_scaffold_86_57
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

79105..80577
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BF81_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13784.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
frrH; putative outer membrane protein
L1_007_000M1_scaffold_86_58
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

80663..81850
DNA (1188bp) protein (396aa)
Glycosyl hydrolase family 16 n=3 Tax=Parabacteroides RepID=A7AA17_9PORP
Glycosyl hydrolase family 16 {ECO:0000313|EMBL:EDN88474.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycoside hydrolase
L1_007_000M1_scaffold_86_59
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

81852..83423
DNA (1572bp) protein (524aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AA16_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13782.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_86_60
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

83420..85576
DNA (2157bp) protein (719aa)
Alpha-N-acetylglucosaminidase (NAGLU) n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XBN3_9PORP
Alpha-N-acetylglucosaminidase (NAGLU) {ECO:0000313|EMBL:CDD13781.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative alpha-N-acetylglucosaminidase
Displaying items 31-60 of 86 in total

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