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L1_007_000M1_scaffold_100

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_100_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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145..1065
DNA (921bp) protein (307aa)
Lyzozyme M1 (1,4-beta-N-acetylmuramidase) n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4I6_9FIRM
Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
Lyzozyme M1 (1,4-beta-N-acetylmuramidase) {ECO:0000313|EMBL:CBL26148.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_100_2
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1066..2022
DNA (957bp) protein (319aa)
[LSU ribosomal protein L11P]-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Ribosomal protein L11 methyltransferase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4I7_9FIRM
L1_007_000M1_scaffold_100_3
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2034..2801
DNA (768bp) protein (256aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
RNA methyltransferase, RsmE family (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NW69_9FIRM
L1_007_000M1_scaffold_100_4
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2866..4023
DNA (1158bp) protein (386aa)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (EC:2.8.1.7)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes n=2 Tax=Clostridiales RepID=D4M4I9_9FIRM
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes {ECO:0000313|EMBL:CDC15444.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_100_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4053..5243
DNA (1191bp) protein (397aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Probable tRNA sulfurtransferase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4J0_9FIRM
thiazole biosynthesis/tRNA modification protein ThiI
L1_007_000M1_scaffold_100_6
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5348..5581)
DNA (234bp) protein (78aa)
PTS HPr component phosphorylation site n=2 Tax=Clostridiales RepID=D4M4J1_9FIRM
PTS HPr component phosphorylation site.
PTS HPr component phosphorylation site {ECO:0000313|EMBL:CDC15442.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_100_7
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5702..7054
DNA (1353bp) protein (451aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PA65_9FIRM
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:CDC15441.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
MiaB-like tRNA modifying enzyme
L1_007_000M1_scaffold_100_8
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7189..7452
DNA (264bp) protein (88aa)
UPF0297 protein RTO_15560 n=2 Tax=Clostridiales RepID=D4M4J3_9FIRM
hypothetical protein
UPF0297 protein BN703_01282 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_100_9
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7460..7897
DNA (438bp) protein (146aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Putative Holliday junction resolvase n=2 Tax=Clostridiales RepID=D4M4J4_9FIRM
conserved hypothetical protein TIGR00250
L1_007_000M1_scaffold_100_10
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7909..8169
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R6NTD0_9FIRM
Protein of unknown function (DUF1292).
Uncharacterized protein {ECO:0000313|EMBL:CDC15438.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_100_11
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8289..8750
DNA (462bp) protein (154aa)
Fe2+/Zn2+ uptake regulation proteins n=2 Tax=Clostridiales RepID=D4M4J6_9FIRM
Fe2+/Zn2+ uptake regulation proteins
Fe2+/Zn2+ uptake regulation proteins {ECO:0000313|EMBL:CDC15437.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_100_12
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8767..10437
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NW60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC15435.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
putative hydrolase of the metallo-beta-lactamase superfamily protein
L1_007_000M1_scaffold_100_13
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10441..11094
DNA (654bp) protein (218aa)
Predicted O-methyltransferase n=2 Tax=Clostridiales RepID=D4M4J7_9FIRM
Predicted O-methyltransferase
Predicted O-methyltransferase {ECO:0000313|EMBL:CDC15433.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_100_14
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11091..12335
DNA (1245bp) protein (415aa)
Collagenase and related proteases (EC:3.4.-.-)
Collagenase and related proteases {ECO:0000313|EMBL:CBL26160.1}; EC=3.4.-.- {ECO:0000313|EMBL:CBL26160.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Collagenase and related proteases n=2 Tax=Clostridiales RepID=D4M4J8_9FIRM
L1_007_000M1_scaffold_100_15
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12352..12969)
DNA (618bp) protein (206aa)
RNA polymerase sigma factor n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NTB9_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
L1_007_000M1_scaffold_100_16
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13212..13943
DNA (732bp) protein (244aa)
Mg chelatase-related protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PA49_9FIRM
Mg chelatase-related protein {ECO:0000313|EMBL:CDC15426.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Mg chelatase-related protein
L1_007_000M1_scaffold_100_17
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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14393..15517
DNA (1125bp) protein (375aa)
Uncharacterized protein (Fragment) n=1 Tax=Blautia sp. KLE 1732 RepID=U2DGL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI95488.1}; Flags: Fragment;; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L1_007_000M1_scaffold_100_18
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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15542..15718
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2ELA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI95487.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L1_007_000M1_scaffold_100_19
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15715..16242
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQD9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO62350.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L1_007_000M1_scaffold_100_20
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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16270..17202
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RNC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36296.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
plasmid segregation actin-type ATPase ParM
L1_007_000M1_scaffold_100_21
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17219..17641
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2EPE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI94846.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L1_007_000M1_scaffold_100_22
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17992..23679
DNA (5688bp) protein (1896aa)
Cna protein B-type domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RFM5_9FIRM
Cna protein B-type domain protein {ECO:0000313|EMBL:ERK52358.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Cna protein B-type domain.
L1_007_000M1_scaffold_100_23
unknown

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23726..23848
DNA (123bp) protein (41aa)

This feature has no annotations

L1_007_000M1_scaffold_100_24
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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23820..24281
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KS20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS49011.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
L1_007_000M1_scaffold_100_25
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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24340..24807
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MX65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS75286.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
L1_007_000M1_scaffold_100_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24857..25177
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45543.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L1_007_000M1_scaffold_100_27
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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25158..25364
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QUT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS20849.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L1_007_000M1_scaffold_100_28
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25435..25743
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000367CAEF
Uncharacterized protein {ECO:0000313|EMBL:EGN48268.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L1_007_000M1_scaffold_100_29
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25751..26650
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2CFU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI89374.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L1_007_000M1_scaffold_100_30
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26850..27956
DNA (1107bp) protein (369aa)
CHC2 zinc finger domain protein (Fragment) n=2 Tax=Blautia sp. KLE 1732 RepID=U2CXU2_9FIRM
CHC2 zinc finger domain protein {ECO:0000313|EMBL:ERI89375.1}; Flags: Fragment;; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
Displaying items 1-30 of 106 in total

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