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L1_007_000M1_scaffold_100_15

Organism: L1_007_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 17
Location: comp(12352..12969)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NTB9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 205.0
  • Bit_score: 404
  • Evalue 4.60e-110
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 205.0
  • Bit_score: 404
  • Evalue 6.40e-110
FliA/WhiG subfamily RNA polymerase sigma-28 subunit similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 200.0
  • Bit_score: 251
  • Evalue 1.10e-64

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Taxonomy

Ruminococcus sp. CAG:55 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 618
TTGAAAGCATTTCCTAATCCCCTCACACCGGCGGAAGAGAAAAAATACATTCAGAGATACACCGAGGGCGATCTGGAAGCCAAGCATATTTTAATTGAACGCAATCTCCGTCTCGTTGCCCATGTTATACGGAAATACCAAAATACCAGTGAAGATCCGGAAGATCTGATTTCCATCGGCACGATTGGCCTGATCAAAGCTATAATTACGTTCGATCCTGAAAAAGGAAATCGTCTGGCTGCCTATGCCTCCCGTTGTGTAGAAAATGAAGTCCTGATGTATCTGCGCGCCAGAAAAAAATGCAGCCATGAAATCTCTCTTTATGAACCGATTGACACAGATCGGGAAGGAAATGAAGTCAACCTCTACGATATCATCGAATCTACAGAAACAGATATTCCAGAGCGGATTCATCTGAAGGACAATATTCAAAAGCTTTATGAAAAACTGGAAAATGAACTTTCTCCAAGAGAAAAACTTGTACTGAAAATGCGATACGGACTATATCAGGGAGAAGAATACACGCAGCGGGAGATTGCCGCACAACTGGGCATCTCCCGCTCCTATGTATCCCGTATCGAAAAAAGTGCTATCGGAAAACTCCGACAATATTTTTGA
PROTEIN sequence
Length: 206
LKAFPNPLTPAEEKKYIQRYTEGDLEAKHILIERNLRLVAHVIRKYQNTSEDPEDLISIGTIGLIKAIITFDPEKGNRLAAYASRCVENEVLMYLRARKKCSHEISLYEPIDTDREGNEVNLYDIIESTETDIPERIHLKDNIQKLYEKLENELSPREKLVLKMRYGLYQGEEYTQREIAAQLGISRSYVSRIEKSAIGKLRQYF*