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L1_007_000M1_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 168 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_106_1
unknown

Not on your lists

2..178
DNA (177bp) protein (59aa)

This feature has no annotations

L1_007_000M1_scaffold_106_2
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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255..1202
DNA (948bp) protein (316aa)
Acetyltransferases n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4Y2_9FIRM
Acetyltransferases {ECO:0000313|EMBL:CDC67270.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Acetyltransferases
L1_007_000M1_scaffold_106_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1501..2403)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TC53_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CDC67269.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_106_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2417..3172)
DNA (756bp) protein (252aa)
Sortase family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1B4_9FIRM
Sortase family protein {ECO:0000313|EMBL:CDC67268.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
yhcS; Uncharacterized protein YhcS-like
L1_007_000M1_scaffold_106_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3176..3778)
DNA (603bp) protein (201aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8Y0_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDC67267.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_106_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4163..6238
DNA (2076bp) protein (692aa)
Glycoside Hydrolase Family 3 protein (EC:3.2.1.-)
Glycoside Hydrolase Family 3 protein {ECO:0000313|EMBL:CCO04977.1}; EC=3.2.1.- {ECO:0000313|EMBL:CCO04977.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Xyl3A n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THA3_9FIRM
L1_007_000M1_scaffold_106_7
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

6325..6906
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003788620
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN26610.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
L1_007_000M1_scaffold_106_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7098..8591
DNA (1494bp) protein (498aa)
epsB; tyrosine-protein kinase (EC:2.7.10.1)
Capsular exopolysaccharide family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4X7_9FIRM
Capsular exopolysaccharide family {ECO:0000313|EMBL:CDC67265.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_106_9
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8611..9315
DNA (705bp) protein (235aa)
capC; Tyrosine-protein phosphatase (EC:3.1.3.48)
Capsular polysaccharide biosynthesis protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TC50_9FIRM
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDC67264.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_106_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9426..11534
DNA (2109bp) protein (703aa)
Polysaccharide biosynthesis protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1B0_9FIRM
Polysaccharide biosynthesis protein CapD-like {ECO:0000313|EMBL:CCO04981.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
capD; polysaccharide biosynthesis protein CapD-like
L1_007_000M1_scaffold_106_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11686..13725
DNA (2040bp) protein (680aa)
Single-stranded-DNA-specific exonuclease {ECO:0000313|EMBL:CCO04982.1}; EC=3.1.-.- {ECO:0000313|EMBL:CCO04982.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
recJ; single-stranded-DNA-specific exonuclease (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UIA6_RUMA7
L1_007_000M1_scaffold_106_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13727..16117
DNA (2391bp) protein (797aa)
(P)ppGpp synthetase I SpoT/RelA n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T174_9FIRM
(P)ppGpp synthetase I SpoT/RelA {ECO:0000313|EMBL:CDC67213.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
RelA/SpoT family protein
L1_007_000M1_scaffold_106_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16131..16775
DNA (645bp) protein (215aa)
Hydroxyacylglutathione hydrolase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8T7_9FIRM
Hydroxyacylglutathione hydrolase {ECO:0000313|EMBL:CDC67212.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L1_007_000M1_scaffold_106_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16772..18229
DNA (1458bp) protein (486aa)
Coproporphyrinogen dehydrogenase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TH44_9FIRM
Radical SAM superfamily protein
Radical SAM superfamily protein {ECO:0000313|EMBL:CCO04985.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_106_15
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18213..19574
DNA (1362bp) protein (454aa)
rumA1; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
RNA methyltransferase TrmA family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4T2_9FIRM
RNA methyltransferase TrmA family {ECO:0000313|EMBL:CDC67210.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_106_16
Dialister sp. CAG:588, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19863..20189
DNA (327bp) protein (109aa)
Transcriptional regulator XRE family n=1 Tax=Dialister sp. CAG:588 RepID=R7PSG8_9FIRM
Transcriptional regulator XRE family {ECO:0000313|EMBL:CDF27208.1}; TaxID=1262871 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:588.;"
putative transcriptional regulator
L1_007_000M1_scaffold_106_17
Dialister sp. CAG:588, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20196..21242
DNA (1047bp) protein (349aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1262871 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:588.;"
Cytosine-specific methyltransferase n=1 Tax=Dialister sp. CAG:588 RepID=R7PS21_9FIRM
DNA-cytosine methyltransferase family protein
L1_007_000M1_scaffold_106_18
Dialister sp. CAG:588, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21286..21699)
DNA (414bp) protein (138aa)
DNA mismatch endonuclease Vsr n=1 Tax=Dialister sp. CAG:588 RepID=R7PQ58_9FIRM
DNA mismatch endonuclease Vsr {ECO:0000313|EMBL:CDF27206.1}; TaxID=1262871 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:588.;"
DNA mismatch endonuclease Vsr
L1_007_000M1_scaffold_106_19
Dialister sp. CAG:588, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21701..23545)
DNA (1845bp) protein (615aa)
Z1 domain n=1 Tax=Dialister sp. CAG:588 RepID=R7PQQ3_9FIRM
Z1 domain {ECO:0000313|EMBL:CDF27205.1}; TaxID=1262871 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:588.;"
Z1 domain.
L1_007_000M1_scaffold_106_20
Dialister sp. CAG:588, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23545..24705)
DNA (1161bp) protein (387aa)
NgoFVII restriction endonuclease n=1 Tax=Dialister sp. CAG:588 RepID=R7PNH5_9FIRM
NgoFVII restriction endonuclease {ECO:0000313|EMBL:CDF27204.1}; TaxID=1262871 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:588.;"
restriction endonuclease
L1_007_000M1_scaffold_106_21
Dialister sp. CAG:588, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24718..24921)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Dialister sp. CAG:588 RepID=R7PSG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF27203.1}; TaxID=1262871 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:588.;"
XRE family transcriptional regulator
L1_007_000M1_scaffold_106_22
Dialister sp. CAG:588, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24939..27320)
DNA (2382bp) protein (794aa)
Uncharacterized protein n=1 Tax=Dialister sp. CAG:588 RepID=R7PS14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF27202.1}; TaxID=1262871 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:588.;"
hypothetical protein
L1_007_000M1_scaffold_106_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27769..27939
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J2B9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43181.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_007_000M1_scaffold_106_24
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28425..28913
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MMY8_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41925.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_007_000M1_scaffold_106_25
Clostridium ljungdahlii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29005..29202
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GLM1_CLOLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK13417.1}; TaxID=748727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC).;"
L1_007_000M1_scaffold_106_26
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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29199..29546
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKS6_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG49633.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
rRNA biogenesis protein rrp5
L1_007_000M1_scaffold_106_27
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29546..30667
DNA (1122bp) protein (374aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=B0MB33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR98708.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
hypothetical protein
L1_007_000M1_scaffold_106_28
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30681..31244
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=B0MB32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR98707.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
hypothetical protein
L1_007_000M1_scaffold_106_29
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31557..33539
DNA (1983bp) protein (661aa)
DNA polymerase I (EC:2.7.7.7)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1AT91_9FIRM
Putative DNA-directed DNA polymerase {ECO:0000313|EMBL:EDR98705.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
L1_007_000M1_scaffold_106_30
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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33631..34299
DNA (669bp) protein (223aa)
Phage regulatory protein, rha family n=1 Tax=Clostridium sp. BNL1100 RepID=H2JAD8_9CLOT
phage regulatory protein, rha family
Phage regulatory protein, rha family {ECO:0000313|EMBL:AEY67732.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
Displaying items 1-30 of 168 in total

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