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L1_007_000M1_scaffold_115

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_115_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..213)
-----------------
DNA (213bp)
protein (71aa)
TrkA C-terminal domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WMG6_9PORP
TrkA C-terminal domain protein {ECO:0000313|EMBL:CDD12368.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
sodium/proton antiporter
L1_007_000M1_scaffold_115_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

667..1098
-----------------
DNA (432bp)
protein (144aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X7P6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12366.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
lipoprotein
L1_007_000M1_scaffold_115_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1689..2837)
-----------------
DNA (1149bp)
protein (383aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AAY5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11292.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
permease
L1_007_000M1_scaffold_115_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2927..4384
-----------------
DNA (1458bp)
protein (486aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Parabacteroides RepID=K5ZIX7_9PORP
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase {ECO:0000313|EMBL:CDD11291.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
D-alanyl-D-alanine carboxypeptidase
L1_007_000M1_scaffold_115_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4439..5152)
-----------------
DNA (714bp)
protein (238aa)
LytTr DNA-binding domain protein n=3 Tax=Parabacteroides RepID=A7AAY7_9PORP
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EDN87963.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
two-component system response regulator
L1_007_000M1_scaffold_115_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5195..6244)
-----------------
DNA (1050bp)
protein (350aa)
Histidine kinase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XYH4_9PORP
Histidine kinase {ECO:0000313|EMBL:CDD11287.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
two-component system sensor histidine kinase
L1_007_000M1_scaffold_115_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6509..7729)
-----------------
DNA (1221bp)
protein (407aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6ATA1_9PORP
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDD11286.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ABC transporter permease
L1_007_000M1_scaffold_115_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7838..8578)
-----------------
DNA (741bp)
protein (247aa)
ABC transporter ATP-binding protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWG8_9PORP
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD11284.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ABC transporter ATP-binding protein
L1_007_000M1_scaffold_115_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8624..9856)
-----------------
DNA (1233bp)
protein (411aa)
Efflux transporter RND family MFP subunit n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XYG4_9PORP
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDD11282.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
efflux system periplasmic protein
L1_007_000M1_scaffold_115_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9990..11345)
-----------------
DNA (1356bp)
protein (452aa)
TolC family type I secretion outer membrane protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZL83_9PORP
TolC family type I secretion outer membrane protein {ECO:0000313|EMBL:EKN12050.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
outer membrane efflux protein
L1_007_000M1_scaffold_115_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11605..12156)
-----------------
DNA (552bp)
protein (184aa)
Chromate transport protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWG2_9PORP
Chromate transport protein {ECO:0000313|EMBL:CDD11279.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
chromate transport protein
L1_007_000M1_scaffold_115_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12158..12688)
-----------------
DNA (531bp)
protein (177aa)
Chromate transport protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WJG4_9PORP
Chromate transport protein {ECO:0000313|EMBL:CDD11278.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
chromate transport protein
L1_007_000M1_scaffold_115_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12695..12973)
-----------------
DNA (279bp)
protein (93aa)
Addiction module toxin RelE/StbE family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XYF7_9PORP
Addiction module toxin RelE/StbE family {ECO:0000313|EMBL:CDD11277.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_115_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12970..13176)
-----------------
DNA (207bp)
protein (69aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Z8V4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11276.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_115_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13239..14831)
-----------------
DNA (1593bp)
protein (531aa)
Peptidase, S41 family n=2 Tax=Parabacteroides merdae RepID=A7AAZ9_9PORP
Peptidase, S41 family {ECO:0000313|EMBL:EDN87975.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
carboxy-terminal processing protease
L1_007_000M1_scaffold_115_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14844..15377)
-----------------
DNA (534bp)
protein (178aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWF7_9PORP
L1_007_000M1_scaffold_115_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15400..17244)
-----------------
DNA (1845bp)
protein (615aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Parabacteroides RepID=A7AB01_9PORP
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDN87977.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
DNA topoisomerase IV subunit B
L1_007_000M1_scaffold_115_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17345..18484)
-----------------
DNA (1140bp)
protein (380aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AB02_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87978.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_115_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18828..20141
-----------------
DNA (1314bp)
protein (438aa)
Nucleotide sugar dehydrogenase n=3 Tax=Parabacteroides RepID=A7AB03_9PORP
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EDN87979.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
UDP-glucose 6-dehydrogenase
L1_007_000M1_scaffold_115_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20564..20755
-----------------
DNA (192bp)
protein (64aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6BFK6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11270.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_115_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20772..22217
-----------------
DNA (1446bp)
protein (482aa)
Polysaccharide biosynthesis protein n=2 Tax=Parabacteroides merdae RepID=A7AB05_9PORP
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDN87981.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
lipopolysaccharide biosynthesis protein
L1_007_000M1_scaffold_115_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22383..23072
-----------------
DNA (690bp)
protein (230aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AB08_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87984.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
acetyl transferase
L1_007_000M1_scaffold_115_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23077..24273
-----------------
DNA (1197bp)
protein (399aa)
UDP-N-acetylglucosamine 2-epimerase n=2 Tax=Parabacteroides merdae RepID=A7AB09_9PORP
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EDN87985.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
UDP-GlcNAc 2-epimerase
L1_007_000M1_scaffold_115_24
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24270..25481
-----------------
DNA (1212bp)
protein (404aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6AFR5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:ETK09913.1}; Flags: Fragment;; TaxID=1411022 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 1/3.;"
glycosyl transferase
L1_007_000M1_scaffold_115_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25483..26490
-----------------
DNA (1008bp)
protein (336aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AB12_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87988.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_115_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26487..27317
-----------------
DNA (831bp)
protein (277aa)
Glycosyltransferase, family 11 n=2 Tax=Parabacteroides merdae RepID=A7AB13_9PORP
Glycosyltransferase, family 11 {ECO:0000313|EMBL:EDN87989.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
putative LPS biosynthesis alpha-1,2-fucosyltransferase
L1_007_000M1_scaffold_115_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27327..28607
-----------------
DNA (1281bp)
protein (427aa)
Nucleotide sugar dehydrogenase n=2 Tax=Parabacteroides merdae RepID=A7AB14_9PORP
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EDN87990.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
nucleotide sugar dehydrogenase
L1_007_000M1_scaffold_115_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28609..29514
-----------------
DNA (906bp)
protein (302aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AB15_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87991.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
sugar transferase
L1_007_000M1_scaffold_115_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29507..30478
-----------------
DNA (972bp)
protein (324aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AB16_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87992.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_115_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30482..30847
-----------------
DNA (366bp)
protein (122aa)
WxcM-like protein n=3 Tax=Parabacteroides RepID=A7AB17_9PORP
WxcM-like protein {ECO:0000313|EMBL:CDD12032.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
WxcM domain-containing protein
Displaying items 1-30 of 92 in total

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