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L1_007_000M1_scaffold_116

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_116_1
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..3836)
DNA (3834bp) protein (1278aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CP43_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG48427.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
hypothetical protein
L1_007_000M1_scaffold_116_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4023..5438)
DNA (1416bp) protein (472aa)
Peptidase dimerization domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBF3_9ACTN
Peptidase dimerization domain protein {ECO:0000313|EMBL:EBA39157.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
peptidase M20
L1_007_000M1_scaffold_116_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5511..6296)
DNA (786bp) protein (262aa)
Putative molybdenum cofactor biosynthesis protein C n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBF2_9ACTN
Putative molybdenum cofactor biosynthesis protein C {ECO:0000313|EMBL:EBA39156.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
amino acid ABC transporter ATP-binding protein
L1_007_000M1_scaffold_116_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6319..7467)
DNA (1149bp) protein (383aa)
ABC transporter, permease protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBF1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72592.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
polar amino acid ABC transporter inner membrane subunit
L1_007_000M1_scaffold_116_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7477..8403)
DNA (927bp) protein (309aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBF0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72591.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
amino acid ABC transporter substrate-binding protein
L1_007_000M1_scaffold_116_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8667..9560)
DNA (894bp) protein (298aa)
Aldose 1-epimerase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBE9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72590.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
aldose-1-epimerase
L1_007_000M1_scaffold_116_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9640..10509)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFL8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35354.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L1_007_000M1_scaffold_116_8
Coriobacterium glomerans, Coriobacterium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10686..11552)
DNA (867bp) protein (289aa)
Transcriptional regulator, MerR family n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2N9Z7_CORGP
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AEB06252.1}; TaxID=700015 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Coriobacterium.;" source="Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 /; PW2).;"
L1_007_000M1_scaffold_116_9
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11644..12222)
DNA (579bp) protein (193aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WHG5_9ACTN
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
L1_007_000M1_scaffold_116_10
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12256..13743)
DNA (1488bp) protein (496aa)
3-polyprenyl-4-hydroxybenzoate decarboxylase-like protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WBX3_DESOD
3-polyprenyl-4-hydroxybenzoate decarboxylase-like protein
3-polyprenyl-4-hydroxybenzoate decarboxylase-like protein {ECO:0000313|EMBL:AET69370.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
L1_007_000M1_scaffold_116_11
Lactobacillus plantarum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13886..15343)
DNA (1458bp) protein (486aa)
cation transporter n=1 Tax=Lactobacillus coryniformis RepID=UPI0002196518
transport protein
Cation transport protein {ECO:0000313|EMBL:CCC80015.1}; TaxID=220668 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1).;"
L1_007_000M1_scaffold_116_12
Coriobacterium glomerans, Coriobacterium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15585..16532)
DNA (948bp) protein (316aa)
NUDIX hydrolase n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2N9Z3_CORGP
NUDIX hydrolase
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|SAAS:SAAS00231155}; TaxID=700015 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Coriobacterium.;" source="Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 /; PW2).;"
L1_007_000M1_scaffold_116_13
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16694..17947
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z935_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35355.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
major facilitator superfamily protein
L1_007_000M1_scaffold_116_14
Olsenella profusa, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18143..19513
DNA (1371bp) protein (457aa)
AAA domain protein n=1 Tax=Olsenella profusa F0195 RepID=U2T3M6_9ACTN
AAA domain protein {ECO:0000313|EMBL:ERL07664.1}; TaxID=1125712 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella profusa F0195.;"
ATPase
L1_007_000M1_scaffold_116_15
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19595..19996
DNA (402bp) protein (134aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Low molecular weight phosphotyrosine protein phosphatase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBE5_9ACTN
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:EBA39149.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L1_007_000M1_scaffold_116_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20122..21483)
DNA (1362bp) protein (454aa)
AAA domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ARS5_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KGI72586.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L1_007_000M1_scaffold_116_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21666..21995)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBE4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72585.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L1_007_000M1_scaffold_116_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21988..22812)
DNA (825bp) protein (275aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Pyridoxal kinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBE3_9ACTN
pyridoxal/pyridoxine/pyridoxamine kinase
L1_007_000M1_scaffold_116_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23260..23766
DNA (507bp) protein (169aa)
Transcriptional regulator, MarR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBE2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72655.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
MarR family transcripitonal regulator
L1_007_000M1_scaffold_116_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23759..25573
DNA (1815bp) protein (605aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z960_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72654.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter
L1_007_000M1_scaffold_116_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25566..27485
DNA (1920bp) protein (640aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBE0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72653.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter
L1_007_000M1_scaffold_116_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27649..27861
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:KGI72652.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L1_007_000M1_scaffold_116_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28043..29134
DNA (1092bp) protein (364aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBD4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72651.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
diguanylate cyclase (GGDEF) domain
L1_007_000M1_scaffold_116_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(29178..30089)
DNA (912bp) protein (304aa)
Transcriptional regulator, LysR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBC7_9ACTN
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EBA39131.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
LysR family transcriptional regulator
L1_007_000M1_scaffold_116_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30290..31171
DNA (882bp) protein (294aa)
fabG; 3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.36)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBC6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72649.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L1_007_000M1_scaffold_116_26
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31238..32494
DNA (1257bp) protein (419aa)
Transporter major facilitator family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8M9_9ACTN
Transporter major facilitator family protein {ECO:0000313|EMBL:CDA36018.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L1_007_000M1_scaffold_116_27
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32564..33604
DNA (1041bp) protein (347aa)
NAD-dependent oxidoreductase (EC:1.1.1.179)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBC4_9ACTN
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EBA39128.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L1_007_000M1_scaffold_116_28
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

34016..36163
DNA (2148bp) protein (716aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D1Y0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72695.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L1_007_000M1_scaffold_116_29
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(36546..37250)
DNA (705bp) protein (235aa)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
translaldolase (EC:2.2.1.2)
Transaldolase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBB7_9ACTN
L1_007_000M1_scaffold_116_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(37444..38271)
DNA (828bp) protein (276aa)
HAD hydrolase family IIB n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZQV7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72693.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
HAD-superfamily hydrolase, subfamily IIB
Displaying items 1-30 of 81 in total

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