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L1_007_000M1_scaffold_120

Search features with annotation key words

Displaying items 31-60 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_120_31
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36571..39369)
DNA (2799bp) protein (933aa)
Polysaccharide lyase family 8 super-sandwich domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZQ6_9PORP
Polysaccharide lyase family 8 super-sandwich domain protein {ECO:0000313|EMBL:CDD14805.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative chondroitinase AC precursor
L1_007_000M1_scaffold_120_32
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39397..40899)
DNA (1503bp) protein (501aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Glycerol kinase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X6P6_9PORP
glycerol kinase
L1_007_000M1_scaffold_120_33
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40980..41126)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WTY7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14803.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_120_34
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41168..43513)
DNA (2346bp) protein (782aa)
Transglycosylase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y8R7_9PORP
Transglycosylase {ECO:0000313|EMBL:CDD14802.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
bifunctional family GT51 beta-glycosyltransferase/PBP transpeptidase
L1_007_000M1_scaffold_120_35
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43595..44641)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AAH2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88079.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transmembrane protein
L1_007_000M1_scaffold_120_36
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44745..45632)
DNA (888bp) protein (296aa)
LysR substrate binding domain protein n=2 Tax=Parabacteroides merdae RepID=A7AAH3_9PORP
LysR substrate binding domain protein {ECO:0000313|EMBL:EDN88080.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transcriptional regulator
L1_007_000M1_scaffold_120_37
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45647..45745)
DNA (99bp) protein (33aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6B5U1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13194.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_120_38
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46734..50015
DNA (3282bp) protein (1094aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y473_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13192.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
outer membrane assembly protein
L1_007_000M1_scaffold_120_39
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(50012..51151)
DNA (1140bp) protein (380aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XA33_9PORP
dTDP-glucose 4,6-dehydratase
L1_007_000M1_scaffold_120_40
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(51174..51827)
DNA (654bp) protein (218aa)
dTDP-4-dehydrorhamnose 3,5-epimerase n=3 Tax=Parabacteroides RepID=A7AAH9_9PORP
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EDN88087.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
dTDP-4-dehydrorhamnose 3,5-epimerase
L1_007_000M1_scaffold_120_41
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

52148..52954
DNA (807bp) protein (269aa)
Metallo-beta-lactamase domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X216_9PORP
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDD13189.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
metallo-beta-lactamase
L1_007_000M1_scaffold_120_42
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(52945..54933)
DNA (1989bp) protein (663aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WPH8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13188.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycoside hydrolase
L1_007_000M1_scaffold_120_43
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

55054..56241
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y470_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13187.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
acetylhydrolase
L1_007_000M1_scaffold_120_44
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

56180..56788
DNA (609bp) protein (203aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AAI3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88090.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
acetylhydrolase
L1_007_000M1_scaffold_120_45
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(57036..57821)
DNA (786bp) protein (262aa)
Metallo-beta-lactamase domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WV47_9PORP
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDD13185.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hydrolase
L1_007_000M1_scaffold_120_46
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(57822..58835)
DNA (1014bp) protein (338aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X211_9PORP
UDP-N-acetylenolpyruvoylglucosamine reductase
L1_007_000M1_scaffold_120_47
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(58832..58972)
DNA (141bp) protein (47aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AAI8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13183.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_120_48
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

59089..59379
DNA (291bp) protein (97aa)
DNA-binding protein HU n=4 Tax=Parabacteroides RepID=A7AAI9_9PORP
DNA-binding protein HU {ECO:0000313|EMBL:EDN88096.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
DNA-binding protein HU-beta
L1_007_000M1_scaffold_120_49
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

59486..60139
DNA (654bp) protein (218aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Putative uracil phosphoribosyltransferase n=2 Tax=Parabacteroides RepID=A7AAJ0_9PORP
Putative uracil phosphoribosyltransferase {ECO:0000313|EMBL:EDN88097.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L1_007_000M1_scaffold_120_50
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(60149..62518)
DNA (2370bp) protein (790aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
PAS domain S-box protein n=2 Tax=Parabacteroides merdae RepID=A7AAJ1_9PORP
PAS domain S-box
L1_007_000M1_scaffold_120_51
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(62687..66139)
DNA (3453bp) protein (1151aa)
PBS lyase HEAT-like repeat protein n=2 Tax=Parabacteroides merdae RepID=A7AAJ2_9PORP
PBS lyase HEAT-like repeat protein {ECO:0000313|EMBL:EDN88099.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_120_52
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(66192..67448)
DNA (1257bp) protein (419aa)
Tat pathway signal sequence domain protein n=3 Tax=Parabacteroides RepID=A7AAJ3_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EDN88100.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
NADH-dependent dehydrogenase
L1_007_000M1_scaffold_120_53
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(67518..68408)
DNA (891bp) protein (297aa)
AP endonuclease, family 2 n=3 Tax=Parabacteroides RepID=A7AAJ4_9PORP
AP endonuclease, family 2 {ECO:0000313|EMBL:EDN88101.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hexulose-6-phosphate isomerase
L1_007_000M1_scaffold_120_54
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(68520..70301)
DNA (1782bp) protein (594aa)
SusD family protein n=3 Tax=Parabacteroides RepID=A7AAJ5_9PORP
SusD family protein {ECO:0000313|EMBL:EDN88102.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_120_55
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(70313..73825)
DNA (3513bp) protein (1171aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XBG7_9PORP
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDD13696.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_120_56
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(73933..74898)
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=R6WWJ3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13695.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_120_57
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(75549..76724)
DNA (1176bp) protein (392aa)
Ser/Thr phosphatase family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WQU7_9PORP
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CDD13693.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
purple acid phosphatase
L1_007_000M1_scaffold_120_58
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(76749..78443)
DNA (1695bp) protein (565aa)
SusD family protein n=3 Tax=Parabacteroides RepID=A7AAK2_9PORP
SusD family protein {ECO:0000313|EMBL:CDD13692.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_120_59
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(78455..81784)
DNA (3330bp) protein (1110aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XBG5_9PORP
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDD13691.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_120_60
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(81966..82946)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWI9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13690.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
FecR/PupR family sigma factor regulatory protein
Displaying items 31-60 of 130 in total

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