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L1_007_000M1_scaffold_120

Search features with annotation key words

Displaying items 1-30 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_120_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(105..5636)
DNA (5532bp) protein (1844aa)
Alpha-2-macroglobulin family protein n=2 Tax=Parabacteroides merdae RepID=A7AFQ6_9PORP
Alpha-2-macroglobulin family protein {ECO:0000313|EMBL:EDN86882.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
outer membrane protein
L1_007_000M1_scaffold_120_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5911..6798)
DNA (888bp) protein (296aa)
Tat pathway signal sequence domain protein n=3 Tax=Parabacteroides RepID=A7AFQ7_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EDN86883.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_120_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6785..8149)
DNA (1365bp) protein (455aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WRY6_9PORP
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Na+/H+ antiporter
L1_007_000M1_scaffold_120_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8222..9415)
DNA (1194bp) protein (398aa)
Transporter CPA2 family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y6N4_9PORP
Transporter CPA2 family {ECO:0000313|EMBL:CDD14067.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Na+/H+ exchange protein
L1_007_000M1_scaffold_120_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9464..10072)
DNA (609bp) protein (203aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K6A8Y4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14593.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L1_007_000M1_scaffold_120_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10076..10294)
DNA (219bp) protein (73aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AFR1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14064.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_120_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10291..13143)
DNA (2853bp) protein (951aa)
Excinuclease ABC subunit A n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZTD9_9PORP
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
excinuclease ABC subunit A
L1_007_000M1_scaffold_120_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13156..14133)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XCK0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14061.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycoside hydrolase
L1_007_000M1_scaffold_120_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14111..15466)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WXN3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14060.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_120_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15761..17149)
DNA (1389bp) protein (463aa)
Phosphoglucosamine mutase n=2 Tax=Parabacteroides merdae RepID=A7AFR6_9PORP
Phosphoglucosamine mutase {ECO:0000313|EMBL:EDN86892.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
phosphoglucomutase
L1_007_000M1_scaffold_120_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17160..17741)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZG2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14700.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_120_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17796..18869)
DNA (1074bp) protein (358aa)
DHHA1 domain protein n=4 Tax=Parabacteroides RepID=A7AFR8_9PORP
DHHA1 domain protein {ECO:0000313|EMBL:EDN86894.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
exopolyphosphatase-like protein
L1_007_000M1_scaffold_120_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18884..20164)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y8H7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14702.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
competence protein
L1_007_000M1_scaffold_120_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20319..20969)
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Ribulose-phosphate 3-epimerase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WTP6_9PORP
ribulose-phosphate 3-epimerase
L1_007_000M1_scaffold_120_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20998..21174)
DNA (177bp) protein (59aa)
Uncharacterized protein n=6 Tax=Parabacteroides RepID=A7AFS1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14704.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_120_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21471..22064)
DNA (594bp) protein (198aa)
Sigma-70 region 2 n=7 Tax=Parabacteroides RepID=A7AAF4_9PORP
Sigma-70 region 2 {ECO:0000313|EMBL:EDN88061.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
RNA polymerase ECF-type sigma factor
L1_007_000M1_scaffold_120_17
unknown

Not on your lists

22591..22728
DNA (138bp) protein (46aa)

This feature has no annotations

L1_007_000M1_scaffold_120_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22706..23092)
DNA (387bp) protein (129aa)
Outer membrane insertion signal domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WTZ9_9PORP
Outer membrane insertion signal domain protein {ECO:0000313|EMBL:CDD14818.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_120_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23200..24738)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y8T0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14817.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_120_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25082..26776)
DNA (1695bp) protein (565aa)
Outer membrane insertion signal domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XEP2_9PORP
Outer membrane insertion signal domain protein {ECO:0000313|EMBL:CDD14816.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_120_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26864..28231)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZR6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14815.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_120_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28781..29344)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X6Q7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14814.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L1_007_000M1_scaffold_120_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29496..30764
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WTZ5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14813.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_120_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30843..31394
DNA (552bp) protein (184aa)
RNA polymerase sigma-70 factor n=3 Tax=Parabacteroides RepID=A7AAG2_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CDD14812.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative RNA polymerase ECF-type sigma factor
L1_007_000M1_scaffold_120_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31387..32235
DNA (849bp) protein (283aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Parabacteroides merdae RepID=A7AAG3_9PORP
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EDN88070.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
anti-sigma factor
L1_007_000M1_scaffold_120_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32266..33825
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZR1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14810.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_120_27
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34205..34294)
DNA (90bp) protein (30aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5XYM5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78990.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
L1_007_000M1_scaffold_120_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34319..34651
DNA (333bp) protein (111aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
6-carboxy-5,6,7,8-tetrahydropterin synthase n=6 Tax=Parabacteroides RepID=A7AAG5_9PORP
6-pyruvoyl tetrahydrobiopterin synthase
L1_007_000M1_scaffold_120_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34638..35180
DNA (543bp) protein (181aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
7-carboxy-7-deazaguanine synthase n=3 Tax=Parabacteroides RepID=A7AAG6_9PORP
hypothetical protein
L1_007_000M1_scaffold_120_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35223..36563)
DNA (1341bp) protein (447aa)
dihydroorotase (EC:3.5.2.3)
Amidohydrolase family protein n=3 Tax=Parabacteroides RepID=A7AAG7_9PORP
Dihydroorotase {ECO:0000256|SAAS:SAAS00252556}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Displaying items 1-30 of 130 in total

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