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L1_007_000M1_scaffold_121

Search features with annotation key words

Displaying items 31-60 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_121_31
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32475..33839
DNA (1365bp) protein (455aa)
Putative efflux protein MATE family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHA1_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CCZ77638.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative efflux protein, MATE family
L1_007_000M1_scaffold_121_32
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34444..35973)
DNA (1530bp) protein (510aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
UTP-hexose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAB3_9FIRM
L1_007_000M1_scaffold_121_33
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36054..37223)
DNA (1170bp) protein (390aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
galactokinase (EC:2.7.1.6)
Galactokinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2L3_9FIRM
L1_007_000M1_scaffold_121_34
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37373..38482)
DNA (1110bp) protein (370aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Glycosyl hydrolase family 53 n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHZ1_9FIRM
glycosyl hydrolase, family 53
L1_007_000M1_scaffold_121_35
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38508..39452)
DNA (945bp) protein (315aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPD9_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CCZ77634.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
AraC-type DNA-binding domain-containing proteins
L1_007_000M1_scaffold_121_36
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39516..39734)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UH96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77633.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_121_37
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39707..41560)
DNA (1854bp) protein (618aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77632.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_121_38
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41955..43136)
DNA (1182bp) protein (394aa)
AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) (EC:2.1.2.3 3.5.4.10)
AICAR transformylase/IMP cyclohydrolase PurH (Only IMP cyclohydrolase domain in Aful) n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2K9_9FIRM
AICAR transformylase/IMP cyclohydrolase PurH (Only IMP cyclohydrolase domain in Aful) {ECO:0000313|EMBL:CCZ77631.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_121_39
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43175..43888)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77630.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_121_40
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44274..45287)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77629.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L1_007_000M1_scaffold_121_41
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45542..46162)
DNA (621bp) protein (207aa)
Methylated-DNA-[protein]-cysteine S-methyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UH92_9FIRM
Methylated-DNA-[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:CCZ77628.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
methylated-DNA-[protein]-cysteine S-methyltransferase
L1_007_000M1_scaffold_121_42
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46194..46874)
DNA (681bp) protein (227aa)
Exonuclease DNA polymerase III epsilon subunit family n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAA5_9FIRM
Exonuclease DNA polymerase III epsilon subunit family {ECO:0000313|EMBL:CCZ77627.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
exonuclease, DNA polymerase III, epsilon subunit family
L1_007_000M1_scaffold_121_43
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46894..47442)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77626.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_121_44
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48090..48557)
DNA (468bp) protein (156aa)
SsrA-binding protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHY3_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
SsrA-binding protein
L1_007_000M1_scaffold_121_45
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48657..50789)
DNA (2133bp) protein (711aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
RNAse R (EC:3.1.-.-)
Ribonuclease R n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPC9_9FIRM
L1_007_000M1_scaffold_121_46
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50851..51090)
DNA (240bp) protein (80aa)
Preprotein translocase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UH87_9FIRM
Preprotein translocase {ECO:0000313|EMBL:CCZ77623.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
preprotein translocase subunit SecG
L1_007_000M1_scaffold_121_47
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51317..52273
DNA (957bp) protein (319aa)
Fimbrial assembly protein PilC n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2K2_9FIRM
Fimbrial assembly protein PilC {ECO:0000313|EMBL:CCZ77621.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Type II secretory pathway, component PulF
L1_007_000M1_scaffold_121_48
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(52268..53638)
DNA (1371bp) protein (457aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHX9_9FIRM
L1_007_000M1_scaffold_121_49
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53769..55220)
DNA (1452bp) protein (484aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPC5_9FIRM
L1_007_000M1_scaffold_121_50
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55257..56729)
DNA (1473bp) protein (491aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Amidophosphoribosyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UH84_9FIRM
amidophosphoribosyltransferase
L1_007_000M1_scaffold_121_51
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56745..57620)
DNA (876bp) protein (292aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VA97_9FIRM
phosphoribosylaminoimidazole-succinocarboxamide synthase
L1_007_000M1_scaffold_121_52
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57640..59181)
DNA (1542bp) protein (514aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2J9_9FIRM
phosphoglyceromutase
L1_007_000M1_scaffold_121_53
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(59285..60796)
DNA (1512bp) protein (504aa)
Capsule synthesis protein CapA n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHX5_9FIRM
Capsule synthesis protein CapA {ECO:0000313|EMBL:CCZ77615.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
capsule synthesis protein CapA
L1_007_000M1_scaffold_121_54
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(60866..61612)
DNA (747bp) protein (249aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=2 Tax=environmental samples RepID=R5UPC0_9FIRM
L1_007_000M1_scaffold_121_55
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61654..62877)
DNA (1224bp) protein (408aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Phosphoglycerate kinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UH79_9FIRM
phosphoglycerate kinase
L1_007_000M1_scaffold_121_56
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(63065..64081)
DNA (1017bp) protein (339aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Glyceraldehyde-3-phosphate dehydrogenase type I n=1 Tax=Roseburia sp. CAG:18 RepID=R5VA94_9FIRM
glyceraldehyde-3-phosphate dehydrogenase, type I
L1_007_000M1_scaffold_121_57
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

64292..65098
DNA (807bp) protein (269aa)
histidinol phosphate phosphatase HisJ family (EC:3.1.3.15)
Histidinol phosphate phosphatase HisJ family n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2J5_9FIRM
Histidinol phosphate phosphatase HisJ family {ECO:0000313|EMBL:CCZ77611.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_121_58
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(65347..66876)
DNA (1530bp) protein (510aa)
Na+/H+ antiporter family protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHX2_9FIRM
Na+/H+ antiporter family protein {ECO:0000313|EMBL:CCZ77610.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transporter, NhaC family (TC 2.A.35)
L1_007_000M1_scaffold_121_59
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(66917..68635)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77609.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Methyl-accepting chemotaxis protein
L1_007_000M1_scaffold_121_60
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(68661..69752)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IT58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE53842.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
alcohol dehydrogenase
Displaying items 31-60 of 130 in total

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