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L1_007_000M1_scaffold_121

Search features with annotation key words

Displaying items 1-30 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_121_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4..249)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GE18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99917.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L1_007_000M1_scaffold_121_2
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(274..2043)
DNA (1770bp) protein (590aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2NZ89_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:ERK43435.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L1_007_000M1_scaffold_121_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2189..2506)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2P2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77666.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_121_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2601..4904)
DNA (2304bp) protein (768aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ATP-dependent DNA helicase PcrA n=1 Tax=Roseburia sp. CAG:18 RepID=R5UI17_9FIRM
ATP-dependent DNA helicase PcrA
L1_007_000M1_scaffold_121_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5068..5718
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77664.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Domain of unknown function (DUF1836).
L1_007_000M1_scaffold_121_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5777..6082)
DNA (306bp) protein (102aa)
TrpR-related protein YerC/YecD n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHC5_9FIRM
TrpR-related protein YerC/YecD {ECO:0000313|EMBL:CCZ77663.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
TrpR-related protein YerC/YecD
L1_007_000M1_scaffold_121_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6230..7123
DNA (894bp) protein (298aa)
CAAX amino terminal protease family protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAD6_9FIRM
CAAX amino terminal protease family protein {ECO:0000313|EMBL:CCZ77662.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
CAAX amino terminal protease family protein
L1_007_000M1_scaffold_121_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7077..7520)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2N7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77661.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_121_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7641..8651
DNA (1011bp) protein (337aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Aspartate--ammonia ligase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UI13_9FIRM
asparagine synthetase AsnA
L1_007_000M1_scaffold_121_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8752..9471)
DNA (720bp) protein (240aa)
Response regulator receiver domain protein n=1 Tax=Roseburia sp. CAG:18 PF9_9FIRM">RepID=R5UPF9_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CCZ77659.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_000M1_scaffold_121_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9468..10529)
DNA (1062bp) protein (354aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHC0_9FIRM
L1_007_000M1_scaffold_121_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10617..12527)
DNA (1911bp) protein (637aa)
NAD synthetase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAD1_9FIRM
NAD synthetase {ECO:0000313|EMBL:CCZ77657.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
NAD synthetase
L1_007_000M1_scaffold_121_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12524..13393)
DNA (870bp) protein (290aa)
33 kDa chaperonin n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2N2_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Disulfide bond chaperones of the HSP33 family
L1_007_000M1_scaffold_121_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13408..14148)
DNA (741bp) protein (247aa)
Methyltransferase domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UI08_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:CCZ77655.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Methyltransferase domain.
L1_007_000M1_scaffold_121_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14267..15310
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 PF5_9FIRM">RepID=R5UPF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77654.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_121_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15307..18003)
DNA (2697bp) protein (899aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHB6_9FIRM
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:CCZ77653.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
multi-sensor hybrid histidine kinase
L1_007_000M1_scaffold_121_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18011..19450)
DNA (1440bp) protein (480aa)
HD-GYP domain-containing protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAC6_9FIRM
HD-GYP domain-containing protein {ECO:0000313|EMBL:CCZ77652.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
HD-GYP domain-containing protein
L1_007_000M1_scaffold_121_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19475..20437)
DNA (963bp) protein (321aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2M7_9FIRM
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000313|EMBL:CCZ77651.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_121_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20598..21569
DNA (972bp) protein (324aa)
Isopropylmalate/homocitrate/citramalate synthases (EC:4.1.3.39)
HMGL family protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UI03_9FIRM
HMGL family protein {ECO:0000313|EMBL:CCZ77650.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_121_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21633..22802)
DNA (1170bp) protein (390aa)
Flagellin lysine-N-methylase n=1 Tax=Roseburia sp. CAG:18 PF2_9FIRM">RepID=R5UPF2_9FIRM
Flagellin lysine-N-methylase {ECO:0000313|EMBL:CCZ77649.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
flagellin lysine-N-methylase
L1_007_000M1_scaffold_121_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22799..23119)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77648.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_121_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23144..23665)
DNA (522bp) protein (174aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ribonucleoside-triphosphate reductase class III activase subunit (EC:1.17.4.2 1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAC1_9FIRM
L1_007_000M1_scaffold_121_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23669..24508)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2M2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77646.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
clfB; fibrinogen and keratin-10 binding surface anchored protein
L1_007_000M1_scaffold_121_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24517..25395)
DNA (879bp) protein (293aa)
Sortase SrtB family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHZ7_9FIRM
Sortase SrtB family {ECO:0000313|EMBL:CCZ77645.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_121_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25399..27585)
DNA (2187bp) protein (729aa)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPE6_9FIRM
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CCZ77644.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
anaerobic ribonucleoside triphosphate reductase
L1_007_000M1_scaffold_121_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27825..28754)
DNA (930bp) protein (310aa)
Esterase/lipase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHA5_9FIRM
Esterase/lipase {ECO:0000313|EMBL:CCZ77643.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Esterase/lipase
L1_007_000M1_scaffold_121_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28751..29416)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77642.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_121_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29409..30707)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2L7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77641.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_121_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30727..31197)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77640.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_121_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31212..32273)
DNA (1062bp) protein (354aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPE3_9FIRM
Displaying items 1-30 of 130 in total

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