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L1_007_000M1_scaffold_131

Search features with annotation key words

Displaying items 31-60 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_131_31
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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32910..33767
DNA (858bp) protein (286aa)
Ribosome biogenesis GTPase A n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULZ5_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ribosome biogenesis GTP-binding protein YlqF
L1_007_000M1_scaffold_131_32
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33760..34521
DNA (762bp) protein (254aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Ribonuclease HII n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6I3_9FIRM
rnhB; ribonuclease HII
L1_007_000M1_scaffold_131_33
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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34558..36351
DNA (1794bp) protein (598aa)
Flagellar hook-length control protein FliK n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEA1_9FIRM
Flagellar hook-length control protein FliK {ECO:0000313|EMBL:CCZ79042.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Flagellar hook-length control protein FliK.
L1_007_000M1_scaffold_131_34
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36353..36688
DNA (336bp) protein (112aa)
Flagellar biosynthesis n=1 Tax=Roseburia sp. CAG:18 RepID=R5UL92_9FIRM
Flagellar biosynthesis {ECO:0000313|EMBL:CCZ79043.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB
L1_007_000M1_scaffold_131_35
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36692..37048
DNA (357bp) protein (119aa)
UPF0102 protein BN518_00350 n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTN9_9FIRM
UPF0102 protein BN518_00350 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
endonuclease
L1_007_000M1_scaffold_131_36
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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37054..37920
DNA (867bp) protein (289aa)
Putative YfiH n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULZ8_9FIRM
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
conserved hypothetical protein TIGR00726
L1_007_000M1_scaffold_131_37
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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38025..38396
DNA (372bp) protein (124aa)
Transcriptional regulator GntR family n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6I7_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CCZ79046.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative transcriptional regulator
L1_007_000M1_scaffold_131_38
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38389..39294
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79047.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC transporter ATP-binding protein
L1_007_000M1_scaffold_131_39
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39269..41164
DNA (1896bp) protein (632aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UL96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79048.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_131_40
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41254..42576
DNA (1323bp) protein (441aa)
GTPase Der n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTP1_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ribosome-associated GTPase EngA
L1_007_000M1_scaffold_131_41
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42579..43232
DNA (654bp) protein (218aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM01_9FIRM
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
acyl-phosphate glycerol-3-phosphate acyltransferase
L1_007_000M1_scaffold_131_42
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43234..44247
DNA (1014bp) protein (338aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
glycerol 3-phosphate dehydrogenase (NAD(P)+) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6I9_9FIRM
L1_007_000M1_scaffold_131_43
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44249..44683
DNA (435bp) protein (145aa)
DeoxyUTP pyrophosphatase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEB2_9FIRM
DeoxyUTP pyrophosphatase {ECO:0000313|EMBL:CCZ79052.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
deoxyUTP pyrophosphatase
L1_007_000M1_scaffold_131_44
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44717..45361
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UL98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79053.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_131_45
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45545..46657
DNA (1113bp) protein (371aa)
ABC-type sugar/spermidine/putrescine/iron/thiamine transport system ATPase component n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTP5_9FIRM
ABC-type sugar/spermidine/putrescine/iron/thiamine transport system ATPase component {ECO:0000313|EMBL:CCZ79054.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_007_000M1_scaffold_131_46
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46740..47834
DNA (1095bp) protein (365aa)
Transcriptional regulator CdaR family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM05_9FIRM
Transcriptional regulator CdaR family {ECO:0000313|EMBL:CCZ79055.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transcriptional regulator, CdaR family
L1_007_000M1_scaffold_131_47
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47868..49781
DNA (1914bp) protein (638aa)
DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6J4_9FIRM
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000313|EMBL:CCZ79056.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
DNA topoisomerase (ATP-hydrolyzing)
L1_007_000M1_scaffold_131_48
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


49819..52050
DNA (2232bp) protein (744aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit (EC:5.99.1.3)
DNA gyrase A subunit n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEB6_9FIRM
L1_007_000M1_scaffold_131_49
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52050..52724
DNA (675bp) protein (225aa)
Predicted phosphatases (EC:3.1.3.18)
Predicted phosphatases n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULA1_9FIRM
Predicted phosphatases {ECO:0000313|EMBL:CCZ79058.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_131_50
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52792..53592
DNA (801bp) protein (267aa)
CAAX amino terminal protease family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTP7_9FIRM
CAAX amino terminal protease family {ECO:0000313|EMBL:CCZ79059.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
CAAX amino terminal protease family.
L1_007_000M1_scaffold_131_51
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53693..55033
DNA (1341bp) protein (447aa)
Putative gamma-D-glutamyl-L-diamino acid endopeptidase 1 n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM07_9FIRM
Putative gamma-D-glutamyl-L-diamino acid endopeptidase 1 {ECO:0000313|EMBL:CCZ79060.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Zinc carboxypeptidase.
L1_007_000M1_scaffold_131_52
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

55113..55895
DNA (783bp) protein (261aa)
HAD-superfamily hydrolase subfamily IIB n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6J7_9FIRM
HAD-superfamily hydrolase subfamily IIB {ECO:0000313|EMBL:CCZ79061.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
HAD-superfamily hydrolase, subfamily IIB
L1_007_000M1_scaffold_131_53
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

55915..56289
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79062.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_131_54
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56402..56686
DNA (285bp) protein (95aa)
10 kDa chaperonin n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULA3_9FIRM
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Co-chaperonin GroES (HSP10)
L1_007_000M1_scaffold_131_55
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56743..58371
DNA (1629bp) protein (543aa)
60 kDa chaperonin n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTQ2_9FIRM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
chaperonin GroEL
L1_007_000M1_scaffold_131_56
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

58551..59417
DNA (867bp) protein (289aa)
EDD domain protein DegV family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM11_9FIRM
EDD domain protein DegV family {ECO:0000313|EMBL:CCZ79065.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
EDD domain protein, DegV family
L1_007_000M1_scaffold_131_57
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

59593..60885
DNA (1293bp) protein (431aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6K0_9FIRM
L1_007_000M1_scaffold_131_58
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

60966..62492
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79067.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_131_59
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

62504..63373
DNA (870bp) protein (290aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULA6_9FIRM
L1_007_000M1_scaffold_131_60
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63366..63995
DNA (630bp) protein (210aa)
Phosphopantetheinyl transferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTQ5_9FIRM
Phosphopantetheinyl transferase {ECO:0000313|EMBL:CCZ79069.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Phosphopantetheinyl transferase
Displaying items 31-60 of 102 in total

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