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L1_007_000M1_scaffold_135

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_135_1
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

2..475
DNA (474bp) protein (158aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R4T2_9FIRM
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CCZ35593.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
RNA polymerase ECF-type sigma factor
L1_007_000M1_scaffold_135_2
unknown

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1243..1380
DNA (138bp) protein (46aa)

This feature has no annotations

L1_007_000M1_scaffold_135_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1426..3333
DNA (1908bp) protein (636aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JA41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78334.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Site-specific recombinases, DNA invertase Pin homologs
L1_007_000M1_scaffold_135_4
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3444..3665)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LV27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS59577.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L1_007_000M1_scaffold_135_5
Eubacterium sp. CAG:248, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3649..5724)
DNA (2076bp) protein (692aa)
Preprotein translocase YidC subunit n=1 Tax=Eubacterium sp. CAG:248 RepID=R6JWU4_9FIRM
Preprotein translocase YidC subunit {ECO:0000313|EMBL:CDB65700.1}; TaxID=1262885 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:248.;"
preprotein translocase subunit YidC
L1_007_000M1_scaffold_135_6
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5737..7467)
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6SV11_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC63800.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
hypothetical protein
L1_007_000M1_scaffold_135_7
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

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comp(7587..8621)
DNA (1035bp) protein (345aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase type I n=2 Tax=Firmicutes RepID=R6RDM4_9FIRM
L1_007_000M1_scaffold_135_8
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(8757..9971)
DNA (1215bp) protein (405aa)
Major facilitator superfamily MFS_1 n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A216_MAHA5
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEE97155.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L1_007_000M1_scaffold_135_9
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10101..11627
DNA (1527bp) protein (509aa)
SSS sodium solute transporter n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QNP1_9FIRM
SSS sodium solute transporter {ECO:0000313|EMBL:CDC32486.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
sodium/proline symporter
L1_007_000M1_scaffold_135_10
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11690..11995)
DNA (306bp) protein (102aa)
Thioredoxin n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P6G6_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
thioredoxin
L1_007_000M1_scaffold_135_11
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12079..12912)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L1E1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67111.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
HAD-superfamily hydrolase, subfamily IIB
L1_007_000M1_scaffold_135_12
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13031..14401
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XCM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA13323.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
fibronectin type III domain-containing protein
L1_007_000M1_scaffold_135_13
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14424..15758
DNA (1335bp) protein (445aa)
MATE efflux family protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RDI4_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDC32537.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
MATE efflux family protein
L1_007_000M1_scaffold_135_14
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16242..17453
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37283
Putative FHA domain protein {ECO:0000313|EMBL:CDA73387.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
FHA domain-containing protein
L1_007_000M1_scaffold_135_15
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17465..18241
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDE9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58390.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
serine/threonine protein phosphatase
L1_007_000M1_scaffold_135_16
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18254..19903
DNA (1650bp) protein (550aa)
Protein kinase family protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6PUV5_9FIRM
Protein kinase family protein {ECO:0000313|EMBL:CDC13522.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
serine/threonine protein kinase fused to TPR repeats domain
L1_007_000M1_scaffold_135_17
unknown

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19941..20423
DNA (483bp) protein (161aa)

This feature has no annotations

L1_007_000M1_scaffold_135_18
Bacillus thermoamylovorans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20471..26047
DNA (5577bp) protein (1859aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KPT5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CEE03247.1}; TaxID=35841 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus thermoamylovorans.;"
L1_007_000M1_scaffold_135_19
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26106..26837
DNA (732bp) protein (244aa)
LytTr DNA-binding domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTF2_9FIRM
Response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CBL24765.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L1_007_000M1_scaffold_135_20
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26908..27441
DNA (534bp) protein (178aa)
FHA domain n=1 Tax=Clostridium sp. CAG:62 RepID=R7C924_9CLOT
FHA domain {ECO:0000313|EMBL:CDD74669.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L1_007_000M1_scaffold_135_21
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27428..29185
DNA (1758bp) protein (586aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RXF5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ39451.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
signaling protein
L1_007_000M1_scaffold_135_22
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29195..30592
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KD13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS44355.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
serine/threonine protein kinase
L1_007_000M1_scaffold_135_23
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30604..31596
DNA (993bp) protein (331aa)
Protein phosphatase 2C n=1 Tax=Coprococcus sp. CAG:782 RepID=R5JLA4_9FIRM
Protein phosphatase 2C {ECO:0000313|EMBL:CCY53539.1}; TaxID=1262863 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:782.;"
Ser/Thr phosphatase
L1_007_000M1_scaffold_135_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31613..32221
DNA (609bp) protein (203aa)
FHA domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K181_9FIRM
FHA domain.
FHA domain {ECO:0000313|EMBL:CBL00030.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_000M1_scaffold_135_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32221..32568
DNA (348bp) protein (116aa)
Predicted integral membrane protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K180_9FIRM
Predicted integral membrane protein
Predicted integral membrane protein {ECO:0000313|EMBL:CBL00029.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_000M1_scaffold_135_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32599..33564
DNA (966bp) protein (322aa)
Predicted integral membrane protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K180_9FIRM
Predicted integral membrane protein
Predicted integral membrane protein {ECO:0000313|EMBL:CBL00029.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_000M1_scaffold_135_27
unknown

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33626..34579
DNA (954bp) protein (318aa)

This feature has no annotations

L1_007_000M1_scaffold_135_28
unknown

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34596..35330
DNA (735bp) protein (245aa)

This feature has no annotations

L1_007_000M1_scaffold_135_29
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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35357..36172
DNA (816bp) protein (272aa)
Conserved hypothetical membrane protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XEY7_9FIRM
Conserved hypothetical membrane protein {ECO:0000313|EMBL:CDA13445.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
L1_007_000M1_scaffold_135_30
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36184..39243
DNA (3060bp) protein (1020aa)
Uncharacterized protein n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N1C6_SLAHD
von Willebrand factor A {ECO:0000313|EMBL:KFI86120.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
hypothetical protein
Displaying items 1-30 of 81 in total

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