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L1_007_000M1_scaffold_150

Search features with annotation key words

Displaying items 31-60 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_150_31
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32692..34032
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79123.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_007_000M1_scaffold_150_32
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34059..35789
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79122.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Methyl-accepting chemotaxis protein
L1_007_000M1_scaffold_150_33
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35813..37648
DNA (1836bp) protein (612aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6N9_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CCZ79121.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
diguanylate cyclase (GGDEF) domain
L1_007_000M1_scaffold_150_34
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37751..37990
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79120.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_150_35
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38020..38973
DNA (954bp) protein (318aa)
Tetratricopeptide repeat n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTU4_9FIRM
Tetratricopeptide repeat {ECO:0000313|EMBL:CCZ79119.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Tetratricopeptide repeat.
L1_007_000M1_scaffold_150_36
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38973..40217
DNA (1245bp) protein (415aa)
GTPase HflX n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULE1_9FIRM
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
small GTP-binding protein domain protein
L1_007_000M1_scaffold_150_37
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40423..42792
DNA (2370bp) protein (790aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Phosphoketolase (EC:4.1.2.22)
Probable phosphoketolase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEH1_9FIRM
L1_007_000M1_scaffold_150_38
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42802..43851)
DNA (1050bp) protein (350aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6N6_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CCZ79116.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
AraC-type DNA-binding domain-containing proteins
L1_007_000M1_scaffold_150_39
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43924..45768)
DNA (1845bp) protein (615aa)
GTP-binding protein TypA/BipA n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM45_9FIRM
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:CCZ79115.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
GTP-binding protein TypA/BipA
L1_007_000M1_scaffold_150_40
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45990..46616
DNA (627bp) protein (209aa)
Single-stranded DNA-binding protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTU0_9FIRM
Single-stranded DNA-binding protein {ECO:0000313|EMBL:CCZ79114.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Single-stranded DNA-binding protein
L1_007_000M1_scaffold_150_41
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46690..47175
DNA (486bp) protein (162aa)
ATP:corrinoid adenosyltransferase (EC:2.5.1.17)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79113.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_150_42
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47462..48349
DNA (888bp) protein (296aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEG9_9FIRM
L1_007_000M1_scaffold_150_43
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48371..49132
DNA (762bp) protein (254aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6N1_9FIRM
L1_007_000M1_scaffold_150_44
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49247..51022
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79110.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_150_45
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51038..52324
DNA (1287bp) protein (429aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Dihydroorotase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTT6_9FIRM
dihydroorotase
L1_007_000M1_scaffold_150_46
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52350..53282
DNA (933bp) protein (311aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
orotidine 5'-phosphate decarboxylase, subfamily 2 (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULD3_9FIRM
L1_007_000M1_scaffold_150_47
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53325..54116
DNA (792bp) protein (264aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEG5_9FIRM
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
L1_007_000M1_scaffold_150_48
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54116..55021
DNA (906bp) protein (302aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
dihydroorotate dehydrogenase (subfamily 1) family protein (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FU28_9FIRM
L1_007_000M1_scaffold_150_49
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

55418..56098
DNA (681bp) protein (227aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Orotate phosphoribosyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6M7_9FIRM
pyrE; orotate phosphoribosyltransferase
L1_007_000M1_scaffold_150_50
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56130..56456
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79105.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_150_51
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56480..58519
DNA (2040bp) protein (680aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79104.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_150_52
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

58549..59049
DNA (501bp) protein (167aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULD0_9FIRM
phosphoribosylaminoimidazole carboxylase
L1_007_000M1_scaffold_150_53
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

59150..60175
DNA (1026bp) protein (342aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEF9_9FIRM
phosphoribosylformylglycinamidine cyclo-ligase
L1_007_000M1_scaffold_150_54
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

60169..60795
DNA (627bp) protein (209aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6M3_9FIRM
L1_007_000M1_scaffold_150_55
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

60824..62098
DNA (1275bp) protein (425aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM33_9FIRM
L1_007_000M1_scaffold_150_56
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

62122..62733
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79099.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_150_57
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

62747..65425
DNA (2679bp) protein (893aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULC7_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CCZ79098.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_150_58
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(65435..67216)
DNA (1782bp) protein (594aa)
Subtilisin-like serine proteases n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEF5_9FIRM
Subtilisin-like serine proteases {ECO:0000313|EMBL:CCZ79097.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
peptidase S8/S53 subtilisin kexin sedolisin
L1_007_000M1_scaffold_150_59
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

67334..68788
DNA (1455bp) protein (485aa)
Ferredoxin hydrogenase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6M2_9FIRM
Ferredoxin hydrogenase {ECO:0000313|EMBL:CCZ79096.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ferredoxin hydrogenase
L1_007_000M1_scaffold_150_60
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

68796..69062
DNA (267bp) protein (89aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM30_9FIRM
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CCZ79095.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ribosomal-protein-alanine acetyltransferase
Displaying items 31-60 of 85 in total

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