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L1_007_000M1_scaffold_153

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Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_153_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..337
DNA (336bp) protein (112aa)
Putative ATP synthase F0, A subunit n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GE17_9FIRM
Putative ATP synthase F0, A subunit {ECO:0000313|EMBL:EEU99916.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ABC-type antimicrobial peptide transport system, permease component
L1_007_000M1_scaffold_153_2
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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475..759
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R6Q6K1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC17547.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_153_3
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(800..1264)
DNA (465bp) protein (155aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:CBL26707.1}; EC=3.1.3.48 {ECO:0000313|EMBL:CBL26707.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Protein-tyrosine-phosphatase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M645_9FIRM
L1_007_000M1_scaffold_153_4
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1316..2023)
DNA (708bp) protein (236aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PGI9_9FIRM
DnaJ-class molecular chaperone with C-terminal Zn finger domain {ECO:0000313|EMBL:CDC17546.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L1_007_000M1_scaffold_153_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2183..3340
DNA (1158bp) protein (386aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CBL26705.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CBL26705.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M643_9FIRM
L1_007_000M1_scaffold_153_6
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3474..4139
DNA (666bp) protein (222aa)
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Deoxyribose-phosphate aldolase n=2 Tax=Clostridiales RepID=D4M642_9FIRM
L1_007_000M1_scaffold_153_7
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4136..5065
DNA (930bp) protein (310aa)
Predicted phosphohydrolases n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NZL9_9FIRM
Predicted phosphohydrolases {ECO:0000313|EMBL:CDC17543.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Predicted phosphohydrolases
L1_007_000M1_scaffold_153_8
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5078..5830
DNA (753bp) protein (251aa)
Segregation and condensation protein A n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q6J6_9FIRM
Segregation and condensation protein A {ECO:0000256|HAMAP-Rule:MF_01805, ECO:0000256|SAAS:SAAS00093938}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
scpA; chromosome segregation and condensation protein ScpA
L1_007_000M1_scaffold_153_9
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5831..6403
DNA (573bp) protein (191aa)
Segregation and condensation protein B n=1 Tax=Ruminococcus torques L2-14 RepID=D4M640_9FIRM
segregation and condensation protein B
Segregation and condensation protein B {ECO:0000256|HAMAP-Rule:MF_01804, ECO:0000256|SAAS:SAAS00086417}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_153_10
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6484..7842
DNA (1359bp) protein (453aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CBL26701.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CBL26701.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M639_9FIRM
L1_007_000M1_scaffold_153_11
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7941..9929
DNA (1989bp) protein (663aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Isopropylmalate/homocitrate/citramalate synthases (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M638_9FIRM
L1_007_000M1_scaffold_153_12
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10034..11974)
DNA (1941bp) protein (647aa)
ATPase components of ABC transporters with duplicated ATPase domains n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NZL4_9FIRM
ATPase components of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:CDC17538.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ATPase components of ABC transporters with duplicated ATPase domains
L1_007_000M1_scaffold_153_13
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12140..12775
DNA (636bp) protein (212aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q6J3_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
CoA-binding protein
L1_007_000M1_scaffold_153_14
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12886..14403
DNA (1518bp) protein (506aa)
YjeF C-terminal region hydroxyethylthiazole kinase-related/yjeF N-terminal region n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PGI1_9FIRM
YjeF C-terminal region hydroxyethylthiazole kinase-related/yjeF N-terminal region {ECO:0000313|EMBL:CDC17536.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region
L1_007_000M1_scaffold_153_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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14407..15573
DNA (1167bp) protein (389aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000313|EMBL:CBL26697.1}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000313|EMBL:CBL26697.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Alanine racemase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M635_9FIRM
L1_007_000M1_scaffold_153_16
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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15722..16069
DNA (348bp) protein (116aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
mRNA interferase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PA21_9FIRM
growth inhibitor
L1_007_000M1_scaffold_153_17
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16209..16940
DNA (732bp) protein (244aa)
Probable transcriptional regulatory protein RTO_21870 n=1 Tax=Ruminococcus torques L2-14 RepID=D4M634_9FIRM
conserved hypothetical protein TIGR01033
Probable transcriptional regulatory protein RTO_21870 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_153_18
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16967..18244
DNA (1278bp) protein (426aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine sulfhydrolase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q6I9_9FIRM
O-acetylhomoserine sulfhydrolase {ECO:0000313|EMBL:CDC17532.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_153_19
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18461..19150
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PGH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17531.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Protease subunit of ATP-dependent Clp proteases
L1_007_000M1_scaffold_153_20
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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19293..22037
DNA (2745bp) protein (915aa)
DNA translocase FtsK n=1 Tax=Ruminococcus torques L2-14 RepID=D4M631_9FIRM
DNA translocase FtsK
DNA translocase FtsK {ECO:0000313|EMBL:CBL26693.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_153_21
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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22078..23748
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=2 Tax=Clostridiales RepID=D4M630_9FIRM
L1_007_000M1_scaffold_153_22
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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23841..24680
DNA (840bp) protein (280aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Ruminococcus torques L2-14 RepID=D4M629_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_153_23
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24694..26046
DNA (1353bp) protein (451aa)
Tetratricopeptide repeat n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q6I5_9FIRM
Tetratricopeptide repeat {ECO:0000313|EMBL:CDC17527.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Tetratricopeptide repeat.
L1_007_000M1_scaffold_153_24
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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26197..27378
DNA (1182bp) protein (394aa)
Alcohol dehydrogenase, class IV n=2 Tax=Clostridiales RepID=D4M627_9FIRM
Alcohol dehydrogenase, class IV
Alcohol dehydrogenase, class IV {ECO:0000313|EMBL:CBL26689.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_153_25
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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27597..28484
DNA (888bp) protein (296aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.97.-.- 1.18.1.2)
Sulfide dehydrogenase (Flavoprotein) subunit SudB n=2 Tax=Clostridiales RepID=D4M626_9FIRM
Sulfide dehydrogenase (Flavoprotein) subunit SudB {ECO:0000313|EMBL:CDC17525.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_153_26
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28484..29872
DNA (1389bp) protein (463aa)
glutamate synthase (NADPH), homotetrameric (EC:1.4.1.13 1.4.1.14)
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:CBL26687.1}; EC=1.4.1.13 {ECO:0000313|EMBL:CBL26687.1};; EC=1.4.1.14 {ECO:0000313|EMBL:CBL26687.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Glutamate synthase (NADPH), homotetrameric n=2 Tax=Clostridiales RepID=D4M625_9FIRM
L1_007_000M1_scaffold_153_27
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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30173..32242
DNA (2070bp) protein (690aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Superfamily I DNA and RNA helicases n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NZK0_9FIRM
L1_007_000M1_scaffold_153_28
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32291..32770
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q6I1_9FIRM
conserved hypothetical protein TIGR00246
L1_007_000M1_scaffold_153_29
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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32856..33143
DNA (288bp) protein (96aa)
Sporulation protein YqfC n=2 Tax=Clostridiales RepID=D4M622_9FIRM
sporulation protein YqfC
Sporulation protein YqfC {ECO:0000313|EMBL:CDC17521.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_153_30
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33140..34390
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P276_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17520.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Putative stage IV sporulation protein YqfD.
Displaying items 1-30 of 89 in total

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