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L1_007_000M1_scaffold_178

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_178_1
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..469
-----------------
DNA (468bp)
protein (156aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5P623_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ09744.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
hypothetical protein
L1_007_000M1_scaffold_178_2
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

576..1436
-----------------
DNA (861bp)
protein (287aa)
FRG domain-containing protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T499_ROSHA
FRG domain-containing protein
FRG domain-containing protein {ECO:0000313|EMBL:AEN97704.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_000M1_scaffold_178_3
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1480..2895
-----------------
DNA (1416bp)
protein (472aa)
Putative transcriptional regulator n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T498_ROSHA
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AEN97703.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_000M1_scaffold_178_4
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2970..3386
-----------------
DNA (417bp)
protein (139aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T497_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97702.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_000M1_scaffold_178_5
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3593..3913
-----------------
DNA (321bp)
protein (107aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T496_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97701.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_000M1_scaffold_178_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3955..4188
-----------------
DNA (234bp)
protein (78aa)
Cell filamentation protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VB79_9FIRM
Cell filamentation protein {ECO:0000313|EMBL:CCZ77962.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Protein involved in cell division
L1_007_000M1_scaffold_178_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4429..6159
-----------------
DNA (1731bp)
protein (577aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UI75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77963.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_178_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6424..7554
-----------------
DNA (1131bp)
protein (377aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77964.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_178_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7610..8968
-----------------
DNA (1359bp)
protein (453aa)
Na+ driven multidrug efflux pump n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIX0_9FIRM
Na+ driven multidrug efflux pump {ECO:0000313|EMBL:CCZ77965.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
MATE family multidrug resistance protein
L1_007_000M1_scaffold_178_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9109..9678
-----------------
DNA (570bp)
protein (190aa)
Transcriptional regulator n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3J4_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCZ77966.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Transcriptional regulator
L1_007_000M1_scaffold_178_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9703..12090
-----------------
DNA (2388bp)
protein (796aa)
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Beta-galactosidase/beta-glucuronidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VB86_9FIRM
Beta-galactosidase/beta-glucuronidase {ECO:0000313|EMBL:CCZ77967.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_178_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12103..13479
-----------------
DNA (1377bp)
protein (459aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Roseburia sp. CAG:18 RepID=R5UI82_9FIRM
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:CCZ77968.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L1_007_000M1_scaffold_178_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13497..15851
-----------------
DNA (2355bp)
protein (785aa)
Alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQC5_9FIRM
Alpha-galactosidase {ECO:0000313|EMBL:CCZ77969.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_178_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15906..16937
-----------------
DNA (1032bp)
protein (344aa)
dacA1; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase DacA1 n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIX8_9FIRM
D-alanyl-D-alanine carboxypeptidase DacA1 {ECO:0000313|EMBL:CCZ77970.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_178_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16969..18048)
-----------------
DNA (1080bp)
protein (360aa)
Two-component system response regulator RpfG n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3K0_9FIRM
Two-component system response regulator RpfG {ECO:0000313|EMBL:CCZ77971.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
two-component system response regulator RpfG
L1_007_000M1_scaffold_178_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18143..19522
-----------------
DNA (1380bp)
protein (460aa)
RNA methylase NOL1/NOP2/sun family protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VB93_9FIRM
RNA methylase NOL1/NOP2/sun family protein {ECO:0000313|EMBL:CCZ77972.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
RNA methylase NOL1/NOP2/sun family protein
L1_007_000M1_scaffold_178_17
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19534..20832)
-----------------
DNA (1299bp)
protein (433aa)
Uncharacterized protein n=3 Tax=Eubacterium RepID=R6TWZ3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC74354.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_007_000M1_scaffold_178_18
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20838..21545)
-----------------
DNA (708bp)
protein (236aa)
Two-component system, LytT family, response regulator n=1 Tax=Clostridium sp. ASF502 RepID=N2A6P5_9CLOT
Two-component system, LytT family, response regulator {ECO:0000313|EMBL:EMZ24997.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Response regulator of the LytR/AlgR family
L1_007_000M1_scaffold_178_19
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21667..21813
-----------------
DNA (147bp)
protein (49aa)
Cyclic lactone autoinducer peptide n=1 Tax=Clostridium sp. ASF502 RepID=N2AKU5_9CLOT
Cyclic lactone autoinducer peptide {ECO:0000313|EMBL:EMZ24999.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L1_007_000M1_scaffold_178_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21816..22427
-----------------
DNA (612bp)
protein (204aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZF56_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR76177.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_178_21
Syntrophaceticus schinkii, Syntrophaceticus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

22532..22678
-----------------
DNA (147bp)
protein (49aa)
Uncharacterized protein {ECO:0000313|EMBL:CEO88397.1}; TaxID=499207 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Syntrophaceticus.;" source="Syntrophaceticus schinkii.;"
L1_007_000M1_scaffold_178_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22772..23401
-----------------
DNA (630bp)
protein (210aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V815_CLOPF
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT70045.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
ABC transporter family protein
L1_007_000M1_scaffold_178_23
Syntrophaceticus schinkii, Syntrophaceticus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

23405..24112
-----------------
DNA (708bp)
protein (236aa)
Putative membrane protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V814_CLOPF
Putative membrane protein {ECO:0000313|EMBL:CEO88483.1}; TaxID=499207 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Syntrophaceticus.;" source="Syntrophaceticus schinkii.;"
yydJ; putative permease for export of a regulatory peptide
L1_007_000M1_scaffold_178_24
Syntrophaceticus schinkii, Syntrophaceticus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

24180..24560
-----------------
DNA (381bp)
protein (127aa)
4Fe-4S single cluster domain protein n=1 Tax=Olsenella profusa F0195 RepID=U2TRA0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CEO88649.1}; TaxID=499207 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Syntrophaceticus.;" source="Syntrophaceticus schinkii.;"
L1_007_000M1_scaffold_178_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24609..25940)
-----------------
DNA (1332bp)
protein (444aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78089.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted ATPase (AAA+ superfamily)
L1_007_000M1_scaffold_178_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26041..26826)
-----------------
DNA (786bp)
protein (262aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78090.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_178_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26819..28258)
-----------------
DNA (1440bp)
protein (480aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3V8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78091.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_178_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28528..30216
-----------------
DNA (1689bp)
protein (563aa)
Na/Pi-cotransporter II-like protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBJ6_9FIRM
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:CCZ78092.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Na/Pi-cotransporter
L1_007_000M1_scaffold_178_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30228..30374
-----------------
DNA (147bp)
protein (49aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78093.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_178_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30319..32373
-----------------
DNA (2055bp)
protein (685aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Polyphosphate kinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQR9_9FIRM
polyphosphate kinase
Displaying items 1-30 of 88 in total

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