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L1_007_000M1_scaffold_202

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_202_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13..618)
DNA (606bp) protein (202aa)
30S ribosomal protein S4 n=4 Tax=Parabacteroides RepID=A7AJZ3_9PORP
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
rpsD; 30S ribosomal protein S4
L1_007_000M1_scaffold_202_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(741..1130)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=18 Tax=Bacteroidales RepID=RS11_PARD8
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L1_007_000M1_scaffold_202_3
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(1142..1522)
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=5 Tax=Parabacteroides RepID=A7AJZ1_9PORP
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
rpsM; 30S ribosomal protein S13
L1_007_000M1_scaffold_202_4
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1558..1674)
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=13 Tax=Parabacteroides RepID=E1Z0G5_9PORP
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
rpmJ; 50S ribosomal protein L36
L1_007_000M1_scaffold_202_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1689..1907)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=9 Tax=Porphyromonadaceae RepID=A7AJZ0_9PORP
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
infA; putative translation initiation factor IF-1
L1_007_000M1_scaffold_202_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1924..2709)
DNA (786bp) protein (262aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Methionine aminopeptidase n=2 Tax=Parabacteroides RepID=K6AUU1_9PORP
methionine aminopeptidase
L1_007_000M1_scaffold_202_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(2715..4055)
DNA (1341bp) protein (447aa)
Protein translocase subunit SecY n=4 Tax=Parabacteroides RepID=A7AJY8_9PORP
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
secY; preprotein translocase subunit SecY
L1_007_000M1_scaffold_202_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(4059..4505)
DNA (447bp) protein (149aa)
50S ribosomal protein L15 n=4 Tax=Parabacteroides RepID=A7AJY7_9PORP
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
rplO; 50S ribosomal protein L15
L1_007_000M1_scaffold_202_9
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(4533..4709)
DNA (177bp) protein (59aa)
50S ribosomal protein L30 n=4 Tax=Parabacteroides RepID=B7BBQ3_9PORP
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
rpmD; 50S ribosomal protein L30
L1_007_000M1_scaffold_202_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(4729..5247)
DNA (519bp) protein (173aa)
30S ribosomal protein S5 n=3 Tax=Parabacteroides RepID=A7AJY5_9PORP
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
rpsE; 30S ribosomal protein S5
L1_007_000M1_scaffold_202_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(5253..5597)
DNA (345bp) protein (115aa)
50S ribosomal protein L18 n=6 Tax=Parabacteroides RepID=A7AJY4_9PORP
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
rplR; 50S ribosomal protein L18
L1_007_000M1_scaffold_202_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(5619..6170)
DNA (552bp) protein (184aa)
50S ribosomal protein L6 n=4 Tax=Parabacteroides RepID=A7AJY3_9PORP
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
rplF; 50S ribosomal protein L6
L1_007_000M1_scaffold_202_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(6187..6582)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=15 Tax=Bacteroidales RepID=RS8_PARD8
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
L1_007_000M1_scaffold_202_14
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(6640..6909)
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=5 Tax=Parabacteroides RepID=A7AJY1_9PORP
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
rpsN; 30S ribosomal protein S14
L1_007_000M1_scaffold_202_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(6916..7473)
DNA (558bp) protein (186aa)
50S ribosomal protein L5 n=3 Tax=Parabacteroides merdae RepID=A7AJY0_9PORP
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
rplE; 50S ribosomal protein L5
L1_007_000M1_scaffold_202_16
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(7473..7793)
DNA (321bp) protein (107aa)
50S ribosomal protein L24 n=5 Tax=Parabacteroides RepID=A7AJX9_9PORP
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
rplX; 50S ribosomal protein L24
L1_007_000M1_scaffold_202_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(7813..8178)
DNA (366bp) protein (122aa)
50S ribosomal protein L14 n=4 Tax=Parabacteroides RepID=A7AJX8_9PORP
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
rplN; 50S ribosomal protein L14
L1_007_000M1_scaffold_202_18
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(8180..8437)
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=4 Tax=Parabacteroides RepID=A7AJX7_9PORP
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
rpsQ; 30S ribosomal protein S17
L1_007_000M1_scaffold_202_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(8443..8643)
DNA (201bp) protein (67aa)
50S ribosomal protein L29 n=5 Tax=Parabacteroides RepID=A7AJX6_9PORP
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
50S ribosomal protein L29
L1_007_000M1_scaffold_202_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(8650..9084)
DNA (435bp) protein (145aa)
50S ribosomal protein L16 n=8 Tax=Parabacteroides RepID=A7AJX5_9PORP
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
rplP; 50S ribosomal protein L16
L1_007_000M1_scaffold_202_21
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(9105..9839)
DNA (735bp) protein (245aa)
30S ribosomal protein S3 n=5 Tax=Parabacteroides RepID=A7AJX4_9PORP
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
rpsC; 30S ribosomal protein S3
L1_007_000M1_scaffold_202_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(9847..10257)
DNA (411bp) protein (137aa)
50S ribosomal protein L22 n=6 Tax=Parabacteroides RepID=A7AJX3_9PORP
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
rplV; 50S ribosomal protein L22
L1_007_000M1_scaffold_202_23
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(10307..10576)
DNA (270bp) protein (90aa)
30S ribosomal protein S19 n=17 Tax=Bacteroidales RepID=RS19_PARD8
rpsS; 30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L1_007_000M1_scaffold_202_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(10597..11421)
DNA (825bp) protein (275aa)
50S ribosomal protein L2 n=3 Tax=Parabacteroides merdae RepID=A7AJX1_9PORP
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
rplB; 50S ribosomal protein L2
L1_007_000M1_scaffold_202_25
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(11430..11723)
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=5 Tax=Parabacteroides RepID=A7AJX0_9PORP
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
rplW; 50S ribosomal protein L23
L1_007_000M1_scaffold_202_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(11735..12364)
DNA (630bp) protein (210aa)
50S ribosomal protein L4 n=2 Tax=Parabacteroides merdae RepID=A7AJW9_9PORP
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
rplD; 50S ribosomal protein L4
L1_007_000M1_scaffold_202_27
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(12364..12981)
DNA (618bp) protein (206aa)
50S ribosomal protein L3 n=5 Tax=Parabacteroides RepID=A7AJW8_9PORP
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
rplC; 50S ribosomal protein L3
L1_007_000M1_scaffold_202_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(13003..13308)
DNA (306bp) protein (102aa)
30S ribosomal protein S10 n=9 Tax=Parabacteroides RepID=A7AJW7_9PORP
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
rpsJ; 30S ribosomal protein S10
L1_007_000M1_scaffold_202_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13330..15453)
DNA (2124bp) protein (708aa)
Elongation factor G n=2 Tax=Parabacteroides merdae RepID=A7AJW6_9PORP
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
fusA; elongation factor G
L1_007_000M1_scaffold_202_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(15475..15951)
DNA (477bp) protein (159aa)
30S ribosomal protein S7 n=4 Tax=Parabacteroides RepID=A7AJW5_9PORP
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
30S ribosomal protein S7
Displaying items 1-30 of 83 in total

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