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L1_007_000M1_scaffold_213

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_213_1
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..315)
DNA (315bp) protein (105aa)
Glutamate dehydrogenase/leucine dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=2 Tax=environmental samples RepID=R5V592_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_213_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(584..1078)
DNA (495bp) protein (165aa)
Transcriptional regulator MarR family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKR5_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CCZ78600.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transcriptional regulator, MarR family
L1_007_000M1_scaffold_213_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1107..2066)
DNA (960bp) protein (320aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.41 2.3.1.180)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Roseburia sp. CAG:18 RepID=R5US95_9FIRM
L1_007_000M1_scaffold_213_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2092..3834)
DNA (1743bp) protein (581aa)
Acetyl-CoA carboxylase {ECO:0000256|SAAS:SAAS00057486}; EC=6.4.1.2 {ECO:0000256|SAAS:SAAS00057486};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunits beta/alpha n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJY7_9FIRM
acetyl-coA carboxylase carboxyl transferase subunit beta/alpha
L1_007_000M1_scaffold_213_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3845..4270)
DNA (426bp) protein (142aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCW9_9FIRM
L1_007_000M1_scaffold_213_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4276..5508)
DNA (1233bp) protein (411aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Roseburia sp. CAG:18 RepID=R5V588_9FIRM
FabF
L1_007_000M1_scaffold_213_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5539..6279)
DNA (741bp) protein (247aa)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKR1_9FIRM
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:CCZ78595.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
3-oxoacyl-ACP reductase
L1_007_000M1_scaffold_213_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6266..7189)
DNA (924bp) protein (308aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5US90_9FIRM
L1_007_000M1_scaffold_213_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7199..8125)
DNA (927bp) protein (309aa)
2-nitropropane dioxygenase-like dioxygenase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJY3_9FIRM
2-nitropropane dioxygenase-like dioxygenase {ECO:0000313|EMBL:CCZ78593.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
2-nitropropane dioxygenase-like dioxygenase
L1_007_000M1_scaffold_213_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8129..8362)
DNA (234bp) protein (78aa)
Acyl carrier protein n=2 Tax=root RepID=R5VCW2_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
acyl carrier protein
L1_007_000M1_scaffold_213_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8573..9511)
DNA (939bp) protein (313aa)
glucokinase (EC:2.7.1.2)
Glucokinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V585_9FIRM
Glucokinase {ECO:0000313|EMBL:CCZ78591.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_213_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9663..12044)
DNA (2382bp) protein (794aa)
Glycosyltransferase Family 51 candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase (Candidate murein polymerase) n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKQ9_9FIRM
Glycosyltransferase Family 51 candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase (Candidate murein polymerase) {ECO:0000313|EMBL:CCZ78590.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
penicillin-binding protein, 1A family
L1_007_000M1_scaffold_213_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12143..12691)
DNA (549bp) protein (183aa)
Stage V sporulation protein T n=1 Tax=Roseburia sp. CAG:18 RepID=R5US86_9FIRM
Stage V sporulation protein T {ECO:0000313|EMBL:CCZ78589.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
AbrB family transcriptional regulator
L1_007_000M1_scaffold_213_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12857..14953
DNA (2097bp) protein (699aa)
Methyl-accepting chemotaxis protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJX9_9FIRM
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CCZ78588.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
methyl-accepting chemotaxis protein
L1_007_000M1_scaffold_213_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15010..17049)
DNA (2040bp) protein (680aa)
Sensory transduction protein kinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCV6_9FIRM
Sensory transduction protein kinase {ECO:0000313|EMBL:CCZ78587.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
diguanylate cyclase (GGDEF) domain
L1_007_000M1_scaffold_213_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17229..18644)
DNA (1416bp) protein (472aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V581_9FIRM
L1_007_000M1_scaffold_213_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19111..20286)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5US81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78584.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_213_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20322..20966)
DNA (645bp) protein (215aa)
Predicted integral membrane protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJX6_9FIRM
Predicted integral membrane protein {ECO:0000313|EMBL:CCZ78583.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_213_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20969..21487)
DNA (519bp) protein (173aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCV1_9FIRM
L1_007_000M1_scaffold_213_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21480..22352)
DNA (873bp) protein (291aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V577_9FIRM
L1_007_000M1_scaffold_213_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22399..24621)
DNA (2223bp) protein (741aa)
Predicted phosphatase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKQ2_9FIRM
Predicted phosphatase {ECO:0000313|EMBL:CCZ78580.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative phosphatase
L1_007_000M1_scaffold_213_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24646..26640)
DNA (1995bp) protein (665aa)
Phosphoglycerol transferase and related proteins alkaline phosphatase superfamily n=1 Tax=Roseburia sp. CAG:18 RepID=R5US78_9FIRM
Phosphoglycerol transferase and related proteins alkaline phosphatase superfamily {ECO:0000313|EMBL:CCZ78579.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L1_007_000M1_scaffold_213_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26724..28121)
DNA (1398bp) protein (466aa)
Radical SAM domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJX2_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:CCZ78578.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted Fe-S oxidoreductases
L1_007_000M1_scaffold_213_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28488..29447
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78577.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_213_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29482..30426)
DNA (945bp) protein (315aa)
2-hydroxyacid dehydrogenase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V573_9FIRM
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:CCZ78576.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
2-hydroxyacid dehydrogenase
L1_007_000M1_scaffold_213_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30514..31557)
DNA (1044bp) protein (348aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Aldose 1-epimerase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKP8_9FIRM
aldose 1-epimerase
L1_007_000M1_scaffold_213_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31704..32282
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5US72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78574.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_213_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32343..32537)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78573.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_213_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32591..33334)
DNA (744bp) protein (248aa)
Sirohydrochlorin cobaltochelatase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCU3_9FIRM
Sirohydrochlorin cobaltochelatase {ECO:0000313|EMBL:CCZ78572.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sirohydrochlorin cobaltochelatase
L1_007_000M1_scaffold_213_30
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(33336..34763)
DNA (1428bp) protein (476aa)
Cobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.11 {ECO:0000256|HAMAP-Rule:MF_00027};; Cobyrinic acid a,c-diamide synthetase {ECO:0000256|HAMAP-Rule:MF_00027}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)/cobyrinate a,c-diamide synthase (EC:6.3.5.9 6.3.5.-)
Cobyrinic acid A,C-diamide synthase n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EQM4_9FIRM
Displaying items 1-30 of 74 in total

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