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L1_007_000M1_scaffold_242

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_242_1
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..502)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9J6X0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS26912.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
Transposase and inactivated derivatives
L1_007_000M1_scaffold_242_2
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(492..1232)
DNA (741bp) protein (247aa)
Metallophosphoesterase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PC86_9FIRM
Metallophosphoesterase {ECO:0000313|EMBL:CDC16151.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
metallophosphoesterase
L1_007_000M1_scaffold_242_3
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1260..1838)
DNA (579bp) protein (193aa)
Predicted phosphoesterase or phosphohydrolase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NVJ7_9FIRM
Predicted phosphoesterase or phosphohydrolase {ECO:0000313|EMBL:CDC16148.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Predicted phosphoesterase or phosphohydrolase
L1_007_000M1_scaffold_242_4
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(1968..2576)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RKV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43676.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L1_007_000M1_scaffold_242_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2747..3535)
DNA (789bp) protein (263aa)
HD domain n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1U6_9FIRM
HD domain.
HD domain {ECO:0000313|EMBL:CBL25208.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_242_6
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3556..3882)
DNA (327bp) protein (109aa)
Calcineurin-like phosphoesterase. (EC:3.1.3.16)
Calcineurin-like phosphoesterase {ECO:0000313|EMBL:CBL25207.1}; EC=3.1.3.16 {ECO:0000313|EMBL:CBL25207.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Calcineurin-like phosphoesterase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1U5_9FIRM
L1_007_000M1_scaffold_242_7
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3979..4338)
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CMQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25481.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Predicted membrane protein
L1_007_000M1_scaffold_242_8
unknown

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comp(4355..4603)
DNA (249bp) protein (83aa)

This feature has no annotations

L1_007_000M1_scaffold_242_9
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4755..5438)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WST7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72950.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Inhibitor of the KinA pathway to sporulation, predicted exonuclease
L1_007_000M1_scaffold_242_10
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5961..7316
DNA (1356bp) protein (452aa)
Hydroxyatrazine ethylaminohydrolase n=1 Tax=Clostridium sp. ASF502 RepID=N2AFA9_9CLOT
Hydroxyatrazine ethylaminohydrolase {ECO:0000313|EMBL:EMZ28097.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hydroxydechloroatrazine ethylaminohydrolase
L1_007_000M1_scaffold_242_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7373..7609
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C024_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49687.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
uracil-xanthine permease
L1_007_000M1_scaffold_242_12
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8033..9580)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q6V0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17672.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L1_007_000M1_scaffold_242_13
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9662..10342)
DNA (681bp) protein (227aa)
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily subfamily IA variant 1 with third motif having Dx(3-4)D or Dx(3-4)E n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PGT1_9FIRM
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily subfamily IA variant 1 with third motif having Dx(3-4)D or Dx(3-4)E {ECO:0000313|EMBL:CDC17671.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
L1_007_000M1_scaffold_242_14
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10320..11660)
DNA (1341bp) protein (447aa)
Putative efflux protein MATE family n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P2K2_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CDC17670.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
putative efflux protein, MATE family
L1_007_000M1_scaffold_242_15
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11686..13194)
DNA (1509bp) protein (503aa)
adenosylcobyric acid synthase (glutamine-hydrolysing) (EC:6.3.5.10)
Cobyric acid synthase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PAB9_9FIRM
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_242_16
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13209..14258)
DNA (1050bp) protein (350aa)
L-threonine O-3-phosphate decarboxylase (EC:4.1.1.81)
L-threonine O-3-phosphate decarboxylase {ECO:0000313|EMBL:CBL25178.1}; EC=4.1.1.81 {ECO:0000313|EMBL:CBL25178.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L-threonine O-3-phosphate decarboxylase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1R6_9FIRM
L1_007_000M1_scaffold_242_17
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14299..14883)
DNA (585bp) protein (195aa)
Sortase and related acyltransferases (EC:2.3.1.-)
Sortase and related acyltransferases n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q6U7_9FIRM
Sortase and related acyltransferases {ECO:0000313|EMBL:CDC17667.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_242_18
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14871..15863)
DNA (993bp) protein (331aa)
adenosylcobinamide-phosphate synthase (EC:6.3.1.10)
Cobalamin biosynthesis protein CobD n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PGS8_9FIRM
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_242_19
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15860..16474)
DNA (615bp) protein (205aa)
Fructose-2,6-bisphosphatase (EC:3.1.3.73)
Fructose-2 6-bisphosphatase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P2J7_9FIRM
Fructose-2 6-bisphosphatase {ECO:0000313|EMBL:CDC17665.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_242_20
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16562..17314)
DNA (753bp) protein (251aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
cobalamin-5'-phosphate synthase (EC:2.7.8.26)
Cobalamin synthase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PAB5_9FIRM
L1_007_000M1_scaffold_242_21
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17333..18451)
DNA (1119bp) protein (373aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NZX2_9FIRM
L1_007_000M1_scaffold_242_22
unknown

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comp(18441..18530)
DNA (90bp) protein (30aa)

This feature has no annotations

L1_007_000M1_scaffold_242_23
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18817..20421
DNA (1605bp) protein (535aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453, ECO:0000313|EMBL:CBL25171.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=2 Tax=Clostridiales RepID=D4M1Q9_9FIRM
L1_007_000M1_scaffold_242_24
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20724..21767
DNA (1044bp) protein (348aa)
Membrane protease subunits, stomatin/prohibitin homologs n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1Q8_9FIRM
Membrane protease subunits, stomatin/prohibitin homologs
Membrane protease subunits, stomatin/prohibitin homologs {ECO:0000313|EMBL:CBL25170.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_242_25
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21770..21979
DNA (210bp) protein (70aa)
Uncharacterized protein conserved in bacteria n=2 Tax=Clostridiales RepID=D4M1Q7_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDC17660.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_242_26
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22040..23524)
DNA (1485bp) protein (495aa)
cobyrinic acid a,c-diamide synthase (EC:6.3.5.9)
Cobyrinic acid a c-diamide synthase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PAB2_9FIRM
Cobyrinic acid a c-diamide synthase {ECO:0000313|EMBL:CDC17659.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_242_27
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23560..24840)
DNA (1281bp) protein (427aa)
precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit/precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit (EC:1.-.-.- 2.1.1.132)
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit/precorrin-6Y C5,15-methyltransferase (Decarboxylating), CbiT subunit {ECO:0000313|EMBL:CBL25167.1}; EC=1.-.-.- {ECO:0000313|EMBL:CBL25167.1};; EC=2.1.1.132 {ECO:0000313|EMBL:CBL25167.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit/precorrin-6Y C5,15-methyltransferase (Decarboxylating), CbiT subunit n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1Q5_9FIRM
L1_007_000M1_scaffold_242_28
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24841..25569)
DNA (729bp) protein (243aa)
precorrin-3 methyltransferase (EC:2.1.1.131)
Precorrin-3 methyltransferase {ECO:0000313|EMBL:CBL25166.1}; EC=2.1.1.131 {ECO:0000313|EMBL:CBL25166.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Precorrin-3 methyltransferase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1Q4_9FIRM
L1_007_000M1_scaffold_242_29
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25566..26396)
DNA (831bp) protein (277aa)
precorrin-4 C11-methyltransferase (EC:2.1.1.133)
Precorrin-4 C11-methyltransferase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PGR9_9FIRM
Precorrin-4 C11-methyltransferase {ECO:0000313|EMBL:CDC17656.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_242_30
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26414..27172)
DNA (759bp) protein (253aa)
precorrin-2 C20-methyltransferase/cobalt-factor II C20-methyltransferase (EC:2.1.1.130 2.1.1.151)
Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase {ECO:0000313|EMBL:CBL25164.1}; EC=2.1.1.130 {ECO:0000313|EMBL:CBL25164.1};; EC=2.1.1.151 {ECO:0000313|EMBL:CBL25164.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1Q2_9FIRM
Displaying items 1-30 of 70 in total

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