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L1_007_000M1_scaffold_271

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_271_1
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..684)
DNA (684bp) protein (228aa)
DNA protecting protein DprA n=2 Tax=Bacteroides RepID=I9EEE8_9BACE
DNA protecting protein DprA {ECO:0000313|EMBL:CCZ73849.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
DNA protecting protein DprA
L1_007_000M1_scaffold_271_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(681..1082)
DNA (402bp) protein (134aa)
Acyl-CoA thioester hydrolase, YbgC/YbaW family n=3 Tax=Bacteroides RepID=A5ZEJ0_9BACE
YbgC/YbaW family acyl-CoA thioester hydrolase {ECO:0000313|EMBL:EIY18348.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
conserved hypothetical protein TIGR00051
L1_007_000M1_scaffold_271_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1120..2409)
DNA (1290bp) protein (430aa)
Peptidase, U32 family {ECO:0000313|EMBL:EDM21357.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDM21357.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
collagenase. Unknown type peptidase. MEROPS family U32 (EC:3.4.-.-)
Peptidase, U32 family n=3 Tax=Bacteroides RepID=A5ZEJ1_9BACE
L1_007_000M1_scaffold_271_4
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2442..3446
DNA (1005bp) protein (335aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
tRNA-dihydrouridine synthase n=2 Tax=Bacteroides RepID=I9PPA1_9BACE
tRNA-U20-dihydrouridine synthase
L1_007_000M1_scaffold_271_5
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3502..4467)
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8UVZ0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73853.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
PAP2 superfamily.
L1_007_000M1_scaffold_271_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4458..5465)
DNA (1008bp) protein (336aa)
NAD dependent epimerase/dehydratase family protein n=3 Tax=Bacteroides RepID=A5ZEJ4_9BACE
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EDM21360.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
NAD-dependent epimerase/dehydratase
L1_007_000M1_scaffold_271_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5815..7971
DNA (2157bp) protein (719aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
RNAse R (EC:3.1.-.-)
Ribonuclease R n=3 Tax=Bacteroides RepID=A5ZEJ5_9BACE
L1_007_000M1_scaffold_271_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8003..8482
DNA (480bp) protein (160aa)
Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZEJ6_9BACE
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:EDM21362.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Predicted flavin-nucleotide-binding protein
L1_007_000M1_scaffold_271_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8485..10845
DNA (2361bp) protein (787aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Glycosyl hydrolase family 3 C-terminal domain protein n=2 Tax=Bacteroides caccae RepID=A5ZEJ7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18340.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_007_000M1_scaffold_271_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10976..12742)
DNA (1767bp) protein (589aa)
CotH protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZEJ8_9BACE
CotH protein {ECO:0000313|EMBL:EDM21364.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_007_000M1_scaffold_271_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12834..13781)
DNA (948bp) protein (316aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Cysteine synthase A n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZEJ9_9BACE
cysteine synthase A
L1_007_000M1_scaffold_271_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13885..14223)
DNA (339bp) protein (113aa)
Cupin domain protein n=3 Tax=Bacteroides RepID=A5ZEK0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18337.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
pectin degradation protein
L1_007_000M1_scaffold_271_13
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14527..14811
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5URV9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73886.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_007_000M1_scaffold_271_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14992..17199)
DNA (2208bp) protein (736aa)
Alpha-N-acetylglucosaminidase (NAGLU) n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UYV8_9BACE
Alpha-N-acetylglucosaminidase (NAGLU) {ECO:0000313|EMBL:CCZ73887.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_007_000M1_scaffold_271_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17236..18684)
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U711_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73888.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
putative lipoprotein
L1_007_000M1_scaffold_271_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18699..20351)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UE00_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73889.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
putative protein-signal peptide and transmembrane prediction
L1_007_000M1_scaffold_271_17
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20371..22218)
DNA (1848bp) protein (616aa)
RagB/SusD family protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U769_9BACE
RagB/SusD family protein {ECO:0000313|EMBL:CCZ73890.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
ragB/SusD family protein
L1_007_000M1_scaffold_271_18
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22230..23384)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5URW7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73891.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
tonB-dependent Receptor Plug domain-containing protein
L1_007_000M1_scaffold_271_19
unknown

Not on your lists

23465..23644
DNA (180bp) protein (60aa)

This feature has no annotations

L1_007_000M1_scaffold_271_20
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23586..24728
DNA (1143bp) protein (381aa)
Site-specific recombinase, phage integrase family n=3 Tax=Bacteroides RepID=C3QQU4_9BACE
Phage integrase {ECO:0000313|EMBL:EFV31485.1}; TaxID=665953 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii 1_2_48FAA.;"
integrase
L1_007_000M1_scaffold_271_21
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24743..25888
DNA (1146bp) protein (382aa)
Site-specific recombinase, phage integrase family n=4 Tax=Bacteroidales RepID=C3QQU3_9BACE
Phage integrase {ECO:0000313|EMBL:EFV31486.1}; TaxID=665953 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii 1_2_48FAA.;"
site-specific recombinase
L1_007_000M1_scaffold_271_22
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26150..27628
DNA (1479bp) protein (493aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=C3QQU2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO54326.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
primosomal protein
L1_007_000M1_scaffold_271_23
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27634..28254
DNA (621bp) protein (207aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=C3QQU1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFK60570.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L1_007_000M1_scaffold_271_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28251..28664
DNA (414bp) protein (138aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=C3QQU0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS14625.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
hypothetical protein
L1_007_000M1_scaffold_271_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28898..29140
DNA (243bp) protein (81aa)
DNA binding domain, excisionase family n=5 Tax=Bacteroidales RepID=C3QQT9_9BACE
DNA binding , excisionase family domain protein {ECO:0000313|EMBL:KDS14624.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
DNA binding domain protein, excisionase
L1_007_000M1_scaffold_271_26
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29171..29644
DNA (474bp) protein (158aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=C3QQT8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFK60567.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L1_007_000M1_scaffold_271_27
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29756..30271
DNA (516bp) protein (172aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=C3QQT7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFK60566.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L1_007_000M1_scaffold_271_28
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30413..30850
DNA (438bp) protein (146aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=C3QQT6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA53498.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
hypothetical protein
L1_007_000M1_scaffold_271_29
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30847..32079
DNA (1233bp) protein (411aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C3QQT5_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFF50002.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L1_007_000M1_scaffold_271_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32086..32622
DNA (537bp) protein (179aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C3QQT4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS14619.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
hypothetical protein
Displaying items 1-30 of 56 in total

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